Factsheet for VIT_15s0024g01440.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13965	Soybean	plastid	70.73	72.25
KRH32944	Soybean	plastid	69.56	70.88
CDY16905	Canola	plastid	65.34	69.58
Bra013962.1-P	Field mustard	plastid	65.11	69.33
CDY38448	Canola	plastid	65.11	69.15
AT5G17630.1	Thale cress	plastid	67.45	69.06
PGSC0003DMT400094749	Potato	plastid	65.57	66.35
Solyc01g081390.2.1	Tomato	plastid	65.34	66.11
GSMUA_Achr6P01190_001	Banana	plastid	59.95	57.92
VIT_10s0116g00760.t01	Wine grape	plastid	40.75	44.27
VIT_19s0177g00300.t01	Wine grape	plastid	40.28	44.22
VIT_10s0003g00300.t01	Wine grape	plastid	33.49	35.22
VIT_17s0000g08560.t01	Wine grape	plastid	32.32	33.66
VIT_01s0011g00600.t01	Wine grape	plastid	31.62	32.61
VIT_01s0011g00590.t01	Wine grape	plastid	29.98	31.07
VIT_14s0066g01000.t01	Wine grape	mitochondrion, plastid	30.21	29.93

Protein Annotations

EntrezGene:100265967	wikigene:100265967	MapMan:24.2.1.1.1	MapMan:9.1.2.1.2	ProteinID:CCB62146	ProteinID:CCB62146.1
UniProt:F6I5C8	EMBL:FN596748	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EntrezGene:LOC100265967
wikigene:LOC100265967	PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF7	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom
TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI00015C9EF3	ArrayExpress:VIT_15s0024g01440	EnsemblPlantsGene:VIT_15s0024g01440
EnsemblPlants:VIT_15s0024g01440.t01	unigene:Vvi.20846	RefSeq:XP_002264736	RefSeq:XP_002264736.2	:	:

Description

No Description!

Coordinates

chr15:-:2868346..2869796

Molecular Weight (calculated)

47441.0 Da

IEP (calculated)

10.181

GRAVY (calculated)

0.282

Length

427 amino acids

Sequence
(BLAST)

001: MLTLNLVPCS NITLSKPKSH QYSINALHRA QNQGDFHLPR GLFNKPKSQV ISNLSRIHGY PFGFCAKPSS QIHDTSAKIK SLDTTGEHPS GVGAKPRSWV
101: AKAAEFEGES EVSKPNKTLQ LGIVFGMWYF QNIVFNIYNK KVLNLFPFPW LLASFQLFVG SVWMLILWSF KLQPCPKISK PFIVALLGPA LFHTIGHISA
201: CVSFSKVAVS FTHVIKSSEP VFSVIFSTIL GDNTYPLRVW LSILPIVLGC SLAAVTEVSF NLQGLWGALI SNVGFVLRNI YSKRSLESFK EVNGLNLYGW
301: ISIISLLYLF PVAIFVEGTQ WIEGYHRAIQ AVGKPTTFYI WVMLSGVFYH LYNQSSYQAL DDISPLTFSV GNTMKRVVVI VATILVFRNP VKPLNALGSA
401: IAIFGTFLYS QATSKKSPKK IEGEKSS

Best Arabidopsis Sequence Match ( AT5G17630.1 )
(BLAST)

001: MISLNLSPSL NPGLLHKTRT CQQPTRLSAL LVTNPKPFNH RHPLGLSPIP NLQIRDVSAK PLLSLTNPES SSGFSRKPRS IAAVGSSDSN PDEKSDLGEA
101: EKKEKKAKTL QLGIVFGLWY FQNIVFNIFN KKALNVFPYP WLLASFQLFA GSIWMLVLWS FKLYPCPKIS KPFIIALLGP ALFHTIGHIS ACVSFSKVAV
201: SFTHVIKSAE PVFSVIFSSL LGDSYPLAVW LSILPIVMGC SLAAVTEVSF NLGGLSGAMI SNVGFVLRNI YSKRSLQSFK EIDGLNLYGC ISILSLLYLF
301: PVAIFVEGSH WVPGYHKAIA SVGTPSTFYF WVLLSGVFYH LYNQSSYQAL DEISPLTFSV GNTMKRVVVI ISTVLVFRNP VRPLNALGSA IAIFGTFLYS
401: QATAKKKKIE VGGDKKN

Arabidopsis Description

XPTXylulose 5-phosphate/phosphate translocator, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.