Factsheet for VIT_10s0116g00760.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0523600-01	Rice	plastid	62.09	88.73
Os07t0523965-01	Rice	plasma membrane	62.09	88.73
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	55.22	87.15
VIT_19s0177g00300.t01	Wine grape	plastid	79.39	80.21
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	12.47	77.78
GSMUA_Achr7P03380_001	Banana	plastid	77.1	77.1
GSMUA_Achr9P11730_001	Banana	plastid	77.35	75.81
TraesCS2A01G220400.1	Wheat	plastid	70.48	72.14
GSMUA_Achr8P07300_001	Banana	mitochondrion, plastid	79.39	71.72
TraesCS2B01G245900.1	Wheat	plastid	69.97	71.61
GSMUA_Achr4P33530_001	Banana	plastid	75.32	71.5
Zm00001d021653_P001	Maize	plastid	68.7	69.05
Zm00001d006511_P002	Maize	plastid	68.7	64.13
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	72.01	63.88
TraesCS2D01G226000.2	Wheat	plastid	69.72	61.85
HORVU2Hr1G045900.2	Barley	plastid	70.23	60.66
Os07t0523400-01	Rice	plasma membrane	36.64	50.7
VIT_15s0024g01440.t01	Wine grape	plastid	44.27	40.75
VIT_01s0011g00600.t01	Wine grape	plastid	34.1	32.37
VIT_10s0003g00300.t01	Wine grape	plastid	33.08	32.02
VIT_17s0000g08560.t01	Wine grape	plastid	32.06	30.73
VIT_01s0011g00590.t01	Wine grape	plastid	31.3	29.85
VIT_14s0066g01000.t01	Wine grape	mitochondrion, plastid	31.3	28.54

Protein Annotations

EntrezGene:100241727	wikigene:100241727	MapMan:24.2.1.1.1	ProteinID:AJV90960.1	EMBL:AM482217	ProteinID:CAN68645
ProteinID:CAN68645.1	ProteinID:CBI23184	ProteinID:CBI23184.3	UniProt:E0CVM3	EMBL:FN595248	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	EntrezGene:LOC100241727	wikigene:LOC100241727	PFAM:PF03151	PANTHER:PTHR43973
PANTHER:PTHR43973:SF1	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGR:TC62960	TIGR:TC63400	TIGR:TC64506
TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI000198432C	ArrayExpress:VIT_10s0116g00760	EnsemblPlantsGene:VIT_10s0116g00760
EnsemblPlants:VIT_10s0116g00760.t01	unigene:Vvi.15002	RefSeq:XP_002266056	RefSeq:XP_002266056.1	SEG:seg	:

Description

GPT2-a [Source:UniProtKB/TrEMBL;Acc:E0CVM3]

Coordinates

chr10:+:340685..344591

Molecular Weight (calculated)

43068.8 Da

IEP (calculated)

9.858

GRAVY (calculated)

0.393

Length

393 amino acids

Sequence
(BLAST)

001: MISSIKQSTG SFTRCDFLPR RQRCVAKSDV VSVPSSANVQ GFKCSAKPLY ICSVEGFGSR SIGSKSSSVC RAYEAERSQP LDLNIELSDQ EARSEAAQKL
101: KIGIYFATWW ALNVVFNIYN KKVLNAFPYP WLTSTLSLAT GSLMMLISWA VRIAEPPKTD LDFWKTLFPV AVAHTIGHVA ATVSMSKVAV SFTHIIKSGE
201: PAFSVLVSRF LLGETFPVPV YFSLLPIIGG CALAAVTELN FNMTGFMGAM ISNLAFVFRN IFSKRGMKGK SVGGMNYYAC LSMLSLLILT PFAIAVEGPQ
301: MWAAGWQKAI SQIGPNFIWW VAAQSVFYHL YNQVSYMSLD QISPLTFSIG NTMKRISVIV SSIIIFHTPV QPINALGAAI AILGTFLYSQ AKQ

Best Arabidopsis Sequence Match ( AT1G61800.1 )
(BLAST)

001: MLSSIKPSSS SFSTAISGSV RRSIPTKLKF SPLLIIKNCH NQSFNANVVS HQKPLHISSA SNFKREVKVE AYEADRSRPL DINIELPDEQ SAQKLKIGIY
101: FATWWALNVV FNIYNKKVLN AFPYPWLTST LSLACGSLMM LVSWATRIAD APKTDLEFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFFMGET FPLPVYLSLL PIIGGCALAA ITELNFNITG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMMS LVILTPFSIA VEGPQMWAAG
301: WQNAVSQVGP NFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSIGNTMKR ISVIVASIII FHTPIQPVNA LGAAIAIFGT FLYSQAKQ

Arabidopsis Description

GPT2glucose-6-phosphate/phosphate translocator 2 [Source:TAIR;Acc:AT1G61800]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.