Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52572 | Canola | plastid | 90.98 | 90.51 |
| Bra029005.1-P | Field mustard | plastid | 90.21 | 89.74 |
| CDY43022 | Canola | plastid | 90.21 | 89.74 |
| Bra002955.1-P | Field mustard | plastid | 91.49 | 85.75 |
| CDY17274 | Canola | plastid | 91.49 | 85.75 |
| CDY19859 | Canola | plastid | 91.49 | 85.75 |
| Os07t0523965-01 | Rice | plasma membrane | 59.79 | 84.36 |
| Os07t0523600-01 | Rice | plastid | 59.79 | 84.36 |
| OQU90029 | Sorghum | cytosol, plasma membrane, vacuole | 53.35 | 83.13 |
| CDY06630 | Canola | plastid | 90.46 | 77.65 |
| Bra022745.1-P | Field mustard | plastid | 89.95 | 77.56 |
| CDY28750 | Canola | plastid | 89.69 | 77.33 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular | 12.37 | 76.19 |
| GSMUA_Achr7P03380_001 | Banana | plastid | 73.45 | 72.52 |
| KRH20881 | Soybean | plastid | 72.68 | 72.12 |
| KRH11399 | Soybean | plastid | 72.42 | 71.87 |
| TraesCS2A01G220400.1 | Wheat | plastid | 70.36 | 71.09 |
| TraesCS2B01G245900.1 | Wheat | plastid | 69.85 | 70.57 |
| GSMUA_Achr9P11730_001 | Banana | plastid | 71.65 | 69.33 |
| AT1G61800.2 | Thale cress | plastid | 72.68 | 68.78 |
| Zm00001d021653_P001 | Maize | plastid | 67.27 | 66.75 |
| GSMUA_Achr8P07300_001 | Banana | mitochondrion, plastid | 74.74 | 66.67 |
| GSMUA_Achr4P33530_001 | Banana | plastid | 70.36 | 65.94 |
| AT4G03950.1 | Thale cress | plasma membrane | 44.85 | 62.82 |
| Zm00001d006511_P002 | Maize | plastid | 67.27 | 62.0 |
| TraesCS2D01G226000.2 | Wheat | plastid | 69.59 | 60.95 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, plastid | 68.81 | 60.27 |
| HORVU2Hr1G045900.2 | Barley | plastid | 69.85 | 59.56 |
| Os07t0523400-01 | Rice | plasma membrane | 36.34 | 49.65 |
| KRH02096 | Soybean | plastid | 73.45 | 47.19 |
| AT5G17630.1 | Thale cress | plastid | 46.91 | 43.65 |
| AT5G46110.4 | Thale cress | mitochondrion | 36.08 | 33.73 |
| AT3G01550.1 | Thale cress | mitochondrion, plastid | 32.22 | 32.64 |
| AT5G33320.1 | Thale cress | plastid | 32.22 | 30.64 |
Protein Annotations
| MapMan:24.2.1.1.1 | EntrezGene:835570 | UniProt:A0A178UL59 | ProteinID:AED96542.1 | EMBL:AF233658 | EMBL:AK226479 |
| ArrayExpress:AT5G54800 | EnsemblPlantsGene:AT5G54800 | RefSeq:AT5G54800 | TAIR:AT5G54800 | RefSeq:AT5G54800-TAIR-G | EnsemblPlants:AT5G54800.1 |
| TAIR:AT5G54800.1 | EMBL:AY057679 | EMBL:AY086600 | Unigene:At.19905 | ProteinID:BAB08759.1 | EMBL:BT002212 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005315 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0007033 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008643 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009553 |
| GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009624 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 |
| GO:GO:0009987 | GO:GO:0010152 | GO:GO:0015120 | GO:GO:0015152 | GO:GO:0015713 | GO:GO:0015714 |
| GO:GO:0015760 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0019904 | GO:GO:0022857 |
| GO:GO:0031969 | GO:GO:0034389 | GO:GO:0035436 | GO:GO:0055085 | GO:GO:0071917 | Symbol:GPT1 |
| RefSeq:NP_568812.1 | ProteinID:OAO94483.1 | PFAM:PF03151 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43973 | PANTHER:PTHR43973:SF1 |
| UniProt:Q9M5A9 | SUPFAM:SSF103481 | InterPro:Sugar_P_trans_dom | TIGRFAMs:TIGR00817 | TMHMM:TMhelix | InterPro:Tpt_PEP_transl |
| UniParc:UPI00000AC3D5 | SEG:seg | : | : | : | : |
Description
GPT1GPT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UL59]
Coordinates
chr5:+:22261134..22263936
Molecular Weight (calculated)
42331.1 Da
IEP (calculated)
10.140
GRAVY (calculated)
0.452
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLSVKQTLS PKIGLFRRNP SSSLGRSPVS LSFPSTELPK RTVLAVSKPL HLSSSLRAKS PVVRCEAYEA DRSEPHPIGD DAAAAETKSE AAKKLKIGIY
101: FATWWALNVV FNIYNKKVLN AYPYPWLTST LSLAAGSLMM LISWAVGIVE TPKTDFDFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFILGET FPTSVYLSLI PIIGGCALSA LTELNFNMIG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMLS LLILTPFAIA VEGPQMWVDG
301: WQTALATVGP QFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSVGNTMKR ISVIVSSIII FRTPVQPVNA LGAAIAILGT FLYSQAKL
101: FATWWALNVV FNIYNKKVLN AYPYPWLTST LSLAAGSLMM LISWAVGIVE TPKTDFDFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFILGET FPTSVYLSLI PIIGGCALSA LTELNFNMIG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMLS LLILTPFAIA VEGPQMWVDG
301: WQTALATVGP QFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSVGNTMKR ISVIVSSIII FRTPVQPVNA LGAAIAILGT FLYSQAKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.