CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43022	Canola	plastid	98.21	98.21
AT5G54800.1	Thale cress	plastid	90.51	90.98
CDY17274	Canola	plastid	92.56	87.2
CDY19859	Canola	plastid	92.56	87.2
Os07t0523965-01	Rice	plasma membrane	59.74	84.73
Os07t0523600-01	Rice	plastid	59.74	84.73
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	52.56	82.33
CDY06630	Canola	plastid	93.08	80.31
CDY28750	Canola	plastid	91.79	79.56
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	12.31	76.19
CDY34641	Canola	plastid	68.97	74.1
CDY55220	Canola	plastid	72.82	73.39
CDY25324	Canola	plastid	73.59	72.66
GSMUA_Achr7P03380_001	Banana	plastid	73.08	72.52
KRH20881	Soybean	plastid	72.05	71.87
KRH11399	Soybean	plastid	72.05	71.87
TraesCS2A01G220400.1	Wheat	plastid	70.26	71.35
TraesCS2B01G245900.1	Wheat	plastid	69.74	70.83
GSMUA_Achr9P11730_001	Banana	plastid	71.28	69.33
Zm00001d021653_P001	Maize	plastid	67.44	67.26
GSMUA_Achr4P33530_001	Banana	plastid	69.74	65.7
GSMUA_Achr8P07300_001	Banana	mitochondrion, plastid	72.56	65.06
Zm00001d006511_P002	Maize	plastid	67.69	62.71
TraesCS2D01G226000.2	Wheat	plastid	70.26	61.85
HORVU2Hr1G045900.2	Barley	plastid	70.26	60.22
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	67.69	59.59
Os07t0523400-01	Rice	plasma membrane	35.9	49.3
KRH02096	Soybean	plastid	72.56	46.85
CDY16905	Canola	plastid	45.13	43.89
CDY38448	Canola	plastid	45.13	43.78
CDY33455	Canola	plastid	34.87	33.42
CDX77632	Canola	plastid	34.87	33.01
CDY48790	Canola	mitochondrion	33.59	32.51
CDY12390	Canola	plastid	33.33	32.34
CDY47555	Canola	plastid	33.33	31.94
CDX91942	Canola	plastid	31.28	31.85
CDX74305	Canola	plastid	31.03	31.68
CDY04362	Canola	plastid	18.46	30.13
CDY53419	Canola	mitochondrion	34.1	25.88

Protein Annotations

MapMan:24.2.1.1.1	GO:A0A078IRH7	UniProt:A0A078IRH7	EnsemblPlants:CDY52572	ProteinID:CDY52572	ProteinID:CDY52572.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00007281001	PFAM:PF03151	PANTHER:PTHR43973
PANTHER:PTHR43973:SF1	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl
UniParc:UPI0004EE9A88	SEG:seg	:	:	:	:

Description

BnaC03g71800DBnaC03g71800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRH7]

Coordinates

chrLK033104:+:52067..53910

Molecular Weight (calculated)

42745.6 Da

IEP (calculated)

10.382

GRAVY (calculated)

0.387

Length

390 amino acids

Sequence
(BLAST)

001: MVLAAKQTLS AKIGFSAPLP RRNPSSSLQR LPLSLSFPSP ALPKRTVLTL SKPLHLSSLR AKSPVRRSAY EADKSEPPQP IDDTKSEAAK KLKIGVYFAT
101: WWALNVVFNI YNKKVLNAYP YPWLTSTLSL AAGSLMMLIS WAVGIVETPK TDFDFWKTLF PVAVAHTIGH VAATVSMSKV AVSFTHIIKS GEPAFSVLVS
201: RFLLGETFPT SVYLSLIPII GGCALSALTE LNFNMIGFMG AMISNLAFVF RNIFSKKGMK GKSVSGMNYY ACLSMLSLLI LTPFAFAVEG PQMWIDGWQK
301: ALSDIGPQFV WWVAAQSVFY HLYNQVSYMS LDQISPLTFS VGNTMKRISV IVSSIIIFRT PVQPVNALGA AIAILGTFLY SQVNHTAHSL

Best Arabidopsis Sequence Match ( AT5G54800.1 )
(BLAST)

001: MVLSVKQTLS PKIGLFRRNP SSSLGRSPVS LSFPSTELPK RTVLAVSKPL HLSSSLRAKS PVVRCEAYEA DRSEPHPIGD DAAAAETKSE AAKKLKIGIY
101: FATWWALNVV FNIYNKKVLN AYPYPWLTST LSLAAGSLMM LISWAVGIVE TPKTDFDFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFILGET FPTSVYLSLI PIIGGCALSA LTELNFNMIG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMLS LLILTPFAIA VEGPQMWVDG
301: WQTALATVGP QFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSVGNTMKR ISVIVSSIII FRTPVQPVNA LGAAIAILGT FLYSQAKL

Arabidopsis Description

GPT1GPT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UL59]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.