CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025037.1-P	Field mustard	mitochondrion, plastid	96.84	98.03
CDY33455	Canola	plastid	96.6	97.79
CDY48790	Canola	mitochondrion	90.29	92.31
AT5G46110.4	Thale cress	mitochondrion	89.56	88.92
Zm00001d046001_P001	Maize	plastid	29.85	84.83
VIT_10s0003g00300.t01	Wine grape	plastid	79.13	80.3
HORVU3Hr1G032490.1	Barley	golgi, plasma membrane	66.02	80.24
KRH50117	Soybean	mitochondrion, plastid	77.91	79.06
KRH20388	Soybean	plastid	77.91	79.06
GSMUA_Achr3P03200_001	Banana	plastid	77.67	78.24
Solyc10g008980.2.1	Tomato	plastid	76.7	76.14
PGSC0003DMT400058772	Potato	plastid	76.46	75.9
GSMUA_Achr10P...	Banana	plastid	75.0	75.37
Zm00001d010043_P001	Maize	cytosol, plasma membrane, plastid	30.58	73.68
CDY53419	Canola	mitochondrion	91.02	72.96
EER99986	Sorghum	plastid	71.36	72.41
TraesCS3D01G168600.1	Wheat	mitochondrion	70.63	72.39
TraesCS3B01G192400.1	Wheat	mitochondrion, plastid	70.15	71.89
Zm00001d039258_P001	Maize	plastid	71.36	71.88
Zm00001d009028_P001	Maize	plastid	70.39	71.6
Os01t0239200-01	Rice	plastid	72.33	71.46
TraesCS3A01G161300.1	Wheat	golgi	70.39	70.22
Os05t0241200-01	Rice	plastid	67.23	68.56
TraesCS1D01G078000.1	Wheat	plastid	67.48	68.47
HORVU1Hr1G016360.1	Barley	plastid	66.99	67.98
TraesCS1A01G075700.2	Wheat	plastid	66.75	67.9
TraesCS1B01G094300.1	Wheat	plastid	66.5	67.49
OQU77692	Sorghum	plastid	67.72	67.07
Zm00001d010044_P001	Maize	mitochondrion, plasma membrane	31.8	60.65
CDY04362	Canola	plastid	34.47	59.41
CDY34641	Canola	plastid	32.52	36.91
CDY55220	Canola	plastid	33.01	35.14
CDY52572	Canola	plastid	33.01	34.87
CDY43022	Canola	plastid	32.77	34.62
CDY25324	Canola	plastid	33.01	34.43
CDY16905	Canola	plastid	33.5	34.41
CDY38448	Canola	plastid	33.5	34.33
CDY19859	Canola	plastid	34.22	34.06
CDY17274	Canola	plastid	33.98	33.82
CDX74305	Canola	plastid	30.58	32.98
CDX91942	Canola	plastid	30.34	32.64
CDY12390	Canola	plastid	31.07	31.84
CDY47555	Canola	plastid	31.31	31.7
CDY28750	Canola	plastid	33.5	30.67
CDY06630	Canola	plastid	33.5	30.53

Protein Annotations

MapMan:24.2.1.1.1	MapMan:3.1.1.1	GO:A0A078CLM3	EnsemblPlants:CDX77632	ProteinID:CDX77632	ProteinID:CDX77632.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00128560001	PFAM:PF03151	PANTHER:PTHR44585
SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0004EE369D
SEG:seg	:	:	:	:	:

Description

BnaC07g18860D

Coordinates

chrLK031812:+:240067..243274

Molecular Weight (calculated)

45145.8 Da

IEP (calculated)

10.183

GRAVY (calculated)

0.584

Length

412 amino acids

Sequence
(BLAST)

001: MESRVLLRAT ATVTGVPQLR RPIRAINRQF STASSSFTAF AKPIGSIGEG GNLISGRQLR PLLLLDSLPE KREILKPVRA AAAEGGDSAG ETKVGFLGKY
101: PWLVTGFFFF MWYFLNVIFN ILNKKIYNYF PYPYFVSVIH LFVGVVYCLV SWSVGLPKRA PINSDILKVL IPVAVCHAIG HVTSNVSFAA VAVSFTHTIK
201: ALEPFFNASA SQFLLGQPIP ITLWLSLAPV VLGVAMASLT ELSFNWLGFI SAMISNISFT YRSIFSKKAM TDMDSTNVYA YISIIALFVC LPPAIIVEGP
301: QLLKHGFNDA IAKVGMTKFI SDLFWVGMFY HLYNQLATNT LERVAPLTHA VGNVLKRVFV IGFSIVIFGN KISTQTGIGT GIAIAGVALY SVIKAKIEEE
401: KRVSSSLFIA IF

Best Arabidopsis Sequence Match ( AT5G46110.4 )
(BLAST)

001: MESRVLLRAT ANVVGIPKLR RPIGAIHRQF STASSSSFSV KPIGGIGEGA NLISGRQLRP ILLLDSSAIN GGEKREILKP VKAAAAEGGD TAGDAKVGFL
101: AKYPWLVTGF FFFMWYFLNV IFNILNKKIY NYFPYPYFVS VIHLFVGVVY CLISWSVGLP KRAPIDSNLL KVLIPVAVCH ALGHVTSNVS FAAVAVSFTH
201: TIKALEPFFN AAASQFIMGQ SIPITLWLSL APVVLGVAMA SLTELSFNWL GFISAMISNI SFTYRSIFSK KAMTDMDSTN VYAYISIIAL FVCIPPAIIV
301: EGPKLLNHGF ADAIAKVGMT KFISDLFWVG MFYHLYNQLA TNTLERVAPL THAVGNVLKR VFVIGFSIVI FGNKISTQTG IGTGIAIAGV AMYSIIKAKI
401: EEEKRVTRKE SIESS

Arabidopsis Description

APE2Glucose-6-phosphate/phosphate translocator-like protein [Source:UniProtKB/TrEMBL;Acc:A0A219I0W9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.