Factsheet for TraesCS1D01G078000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G075700.2	Wheat	plastid	97.78	98.02
TraesCS1B01G094300.1	Wheat	plastid	97.29	97.29
HORVU1Hr1G016360.1	Barley	plastid	94.58	94.58
Zm00001d010043_P001	Maize	cytosol, plasma membrane, plastid	33.74	80.12
Os05t0241200-01	Rice	plastid	76.6	76.98
TraesCS3D01G168600.1	Wheat	mitochondrion	73.4	74.13
OQU77692	Sorghum	plastid	75.62	73.8
KRH20388	Soybean	plastid	70.94	70.94
GSMUA_Achr3P03200_001	Banana	plastid	70.94	70.42
KRH50117	Soybean	mitochondrion, plastid	70.2	70.2
CDY48790	Canola	mitochondrion	69.21	69.73
GSMUA_Achr10P...	Banana	plastid	70.2	69.51
VIT_10s0003g00300.t01	Wine grape	plastid	69.46	69.46
Bra025037.1-P	Field mustard	mitochondrion, plastid	68.97	68.8
CDY33455	Canola	plastid	68.72	68.55
CDX77632	Canola	plastid	68.47	67.48
AT5G46110.4	Thale cress	mitochondrion	68.23	66.75
PGSC0003DMT400058772	Potato	plastid	67.98	66.51
Solyc10g008980.2.1	Tomato	plastid	67.49	66.02
Zm00001d010044_P001	Maize	mitochondrion, plasma membrane	34.73	65.28
CDY53419	Canola	mitochondrion	69.21	54.67
CDY04362	Canola	plastid	30.79	52.3
Bra022019.1-P	Field mustard	mitochondrion	69.46	43.99
TraesCS7D01G288100.2	Wheat	plastid	32.76	33.93
TraesCS5D01G182500.1	Wheat	plastid	30.79	31.17
TraesCS2D01G226000.2	Wheat	plastid	31.77	29.12
TraesCS3D01G131200.1	Wheat	plastid	27.83	28.39
TraesCS1D01G116600.1	Wheat	plastid	28.08	28.22

Protein Annotations

MapMan:24.2.1.1.1	MapMan:3.1.1.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	PFAM:PF03151
PANTHER:PTHR44585	PANTHER:PTHR44585:SF1	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix
InterPro:Tpt_PEP_transl	EnsemblPlantsGene:TraesCS1D01G078000	EnsemblPlants:TraesCS1D01G078000.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr1D:-:59965942..59970493

Molecular Weight (calculated)

43687.8 Da

IEP (calculated)

10.331

GRAVY (calculated)

0.550

Length

406 amino acids

Sequence
(BLAST)

001: MTALATILCG GAVAGHQRSR RRAAPSLHVR GGSASDAAHL VCGRKLRPAL FPASSFGTLP LSSPGSRKLL RTSASAAAPS SDSQGQAKPI GFLERYPALV
101: TGFFFFMWYF LNVIFNILNK KIFDYFPYPY FVSVTHLSVG VLYCLISWST GLLKRAPMNS TLLKLLLPVA ICHAIGHVTS TVSFAAVSVS FAHTIKALEP
201: FFNAAASQFI LGQQVPFTLW LSLAPVVIGV SVASLTELSF NWTGFINAMI SNISFTYRSI YSKKAMTDMD STNLYAYISI IALIVCIPPA LIIEGPQLVQ
301: HGFKDAIAKV GLTKLVSNIF LAGLFYHLYN QVATNTLQRV APLTHAVGNV LKRVFVIGFS IIIFGNKITT QTGIGTGIAI SGVALYSVIK AKIEEEKKEG
401: VAAVAP

Best Arabidopsis Sequence Match ( AT5G46110.1 )
(BLAST)

001: MESRVLLRAT ANVVGIPKLR RPIGAIHRQF STASSSSFSV KPIGGIGEGA NLISGRQLRP ILLLDSSAIN GGEKREILKP VKAAAAEGGD TAGDAKVGFL
101: AKYPWLVTGF FFFMWYFLNV IFNILNKKIY NYFPYPYFVS VIHLFVGVVY CLISWSVGLP KRAPIDSNLL KVLIPVAVCH ALGHVTSNVS FAAVAVSFTH
201: TIKALEPFFN AAASQFIMGQ SIPITLWLSL APVVLGVAMA SLTELSFNWL GFISAMISNI SFTYRSIFSK KAMTDMDSTN VYAYISIIAL FVCIPPAIIV
301: EGPKLLNHGF ADAIAKVGMT KFISDLFWVG MFYHLYNQLA TNTLERVAPL THAVGNVLKR VFVIGFSIVI FGNKISTQTG IGTGIAIAGV AMYSIIKAKI
401: EEEKRQGKKA

Arabidopsis Description

APE2Glucose-6-phosphate/phosphate translocator-like protein [Source:UniProtKB/TrEMBL;Acc:A0A219I0W9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.