CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33455	Canola	plastid	93.05	92.14
CDX77632	Canola	plastid	92.31	90.29
AT5G46110.4	Thale cress	mitochondrion	89.83	87.23
Zm00001d046001_P001	Maize	plastid	31.02	86.21
VIT_10s0003g00300.t01	Wine grape	plastid	80.15	79.56
HORVU3Hr1G032490.1	Barley	golgi, plasma membrane	66.75	79.35
KRH20388	Soybean	plastid	79.4	78.82
KRH50117	Soybean	mitochondrion, plastid	78.91	78.33
GSMUA_Achr3P03200_001	Banana	plastid	78.16	77.02
CDY53419	Canola	mitochondrion	97.02	76.07
Solyc10g008980.2.1	Tomato	plastid	76.43	74.22
PGSC0003DMT400058772	Potato	plastid	76.43	74.22
GSMUA_Achr10P...	Banana	plastid	74.94	73.66
Zm00001d010043_P001	Maize	cytosol, plasma membrane, plastid	31.02	73.1
Zm00001d009028_P001	Maize	plastid	73.45	73.09
EER99986	Sorghum	plastid	73.2	72.66
Zm00001d039258_P001	Maize	plastid	73.7	72.62
TraesCS3D01G168600.1	Wheat	mitochondrion	70.97	71.14
TraesCS3B01G192400.1	Wheat	mitochondrion, plastid	70.72	70.9
Os01t0239200-01	Rice	plastid	72.7	70.26
TraesCS1D01G078000.1	Wheat	plastid	69.73	69.21
TraesCS1A01G075700.2	Wheat	plastid	69.23	68.89
TraesCS3A01G161300.1	Wheat	golgi	70.22	68.52
HORVU1Hr1G016360.1	Barley	plastid	68.73	68.23
Os05t0241200-01	Rice	plastid	67.99	67.82
TraesCS1B01G094300.1	Wheat	plastid	68.24	67.73
OQU77692	Sorghum	plastid	68.49	66.35
Bra022019.1-P	Field mustard	mitochondrion	98.51	61.93
CDY04362	Canola	plastid	36.23	61.09
Zm00001d010044_P001	Maize	mitochondrion, plasma membrane	31.51	58.8
CDY34641	Canola	plastid	32.01	35.54
CDY16905	Canola	plastid	33.99	34.16
CDY38448	Canola	plastid	33.99	34.08
CDY55220	Canola	plastid	32.26	33.59
CDY52572	Canola	plastid	32.51	33.59
CDY43022	Canola	plastid	32.26	33.33
CDY25324	Canola	plastid	32.26	32.91
CDY17274	Canola	plastid	33.75	32.85
CDY19859	Canola	plastid	33.75	32.85
CDX74305	Canola	plastid	30.77	32.46
CDX91942	Canola	plastid	30.52	32.11
CDY12390	Canola	plastid	32.01	32.09
CDY47555	Canola	plastid	32.26	31.94
CDY28750	Canola	plastid	33.0	29.56
CDY06630	Canola	plastid	33.0	29.42

Protein Annotations

MapMan:24.2.1.1.1	MapMan:3.1.1.1	GO:A0A078ID05	UniProt:A0A078ID05	EnsemblPlants:CDY48790	ProteinID:CDY48790
ProteinID:CDY48790.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00091710001	PFAM:PF03151
PANTHER:PTHR44585	PANTHER:PTHR44585:SF1	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix
InterPro:Tpt_PEP_transl	UniParc:UPI0004EE93FF	SEG:seg	:	:	:

Description

BnaA02g24310DBnaA02g24310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ID05]

Coordinates

chrLK032791:+:111839..114883

Molecular Weight (calculated)

44011.5 Da

IEP (calculated)

10.293

GRAVY (calculated)

0.549

Length

403 amino acids

Sequence
(BLAST)

001: MESRVLLRAA VTGVPQLRRP IGAIHRQVST ASSFTAFAKP IGSAGEGGNL ISGRQLRPIL LLDSSPEKRE ILKPVRAAAG DSAGEAKVGF LGKYPWLVTG
101: FFFFMWYVYF LNVIFNILNK KIYNYFPYPY FVSAVHLFVG VVYCLLSWSV GLPKRAPINS NLLKVLIPVA VCHAIGHITS NISFAAVAVS FTHTIKALEP
201: FFNASASQFL LGQSIPITLW LSLAPVVFGV AMASLTELSF NWLGFISAMI SNISFTYRSI FSKKAMTDMD STNVYAYISI IALIVCIPPA IIVEGPQLLK
301: HGFSDAIAKV GMTKFISDLF WVGMFYHLYN QLATNTLERV APLTHAVGNV LKRVFVIGFS IVIFGNKIST QTGIGTGIAI AGVAMYSIIK AKIEEDKKKG
401: KTA

Best Arabidopsis Sequence Match ( AT5G46110.1 )
(BLAST)

001: MESRVLLRAT ANVVGIPKLR RPIGAIHRQF STASSSSFSV KPIGGIGEGA NLISGRQLRP ILLLDSSAIN GGEKREILKP VKAAAAEGGD TAGDAKVGFL
101: AKYPWLVTGF FFFMWYFLNV IFNILNKKIY NYFPYPYFVS VIHLFVGVVY CLISWSVGLP KRAPIDSNLL KVLIPVAVCH ALGHVTSNVS FAAVAVSFTH
201: TIKALEPFFN AAASQFIMGQ SIPITLWLSL APVVLGVAMA SLTELSFNWL GFISAMISNI SFTYRSIFSK KAMTDMDSTN VYAYISIIAL FVCIPPAIIV
301: EGPKLLNHGF ADAIAKVGMT KFISDLFWVG MFYHLYNQLA TNTLERVAPL THAVGNVLKR VFVIGFSIVI FGNKISTQTG IGTGIAIAGV AMYSIIKAKI
401: EEEKRQGKKA

Arabidopsis Description

APE2Glucose-6-phosphate/phosphate translocator-like protein [Source:UniProtKB/TrEMBL;Acc:A0A219I0W9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.