CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031393.1-P	Field mustard	plastid	98.97	97.7
CDY25324	Canola	plastid	96.64	94.68
Os07t0523965-01	Rice	plasma membrane	63.57	89.45
Os07t0523600-01	Rice	plastid	63.57	89.45
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	57.36	89.16
AT1G61800.2	Thale cress	plastid	89.66	84.63
CDY34641	Canola	plastid	78.81	84.02
KRH20881	Soybean	plastid	80.1	79.28
KRH11399	Soybean	plastid	79.84	79.03
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	12.66	77.78
TraesCS2A01G220400.1	Wheat	plastid	73.39	73.96
GSMUA_Achr7P03380_001	Banana	plastid	74.94	73.79
TraesCS2B01G245900.1	Wheat	plastid	72.87	73.44
GSMUA_Achr9P11730_001	Banana	plastid	75.71	73.07
CDY52572	Canola	plastid	73.39	72.82
Solyc05g045670.2.1	Tomato	plastid	74.68	72.07
PGSC0003DMT400013500	Potato	plastid	74.68	72.07
CDY43022	Canola	plastid	72.35	71.79
PGSC0003DMT400065527	Potato	plastid	73.64	70.37
Zm00001d021653_P001	Maize	plastid	70.54	69.82
CDY19859	Canola	plastid	73.64	68.84
GSMUA_Achr4P33530_001	Banana	plastid	73.64	68.84
CDY17274	Canola	plastid	73.39	68.6
GSMUA_Achr8P07300_001	Banana	mitochondrion, plastid	75.71	67.36
Zm00001d006511_P002	Maize	plastid	70.28	64.61
TraesCS2D01G226000.2	Wheat	plastid	72.61	63.43
CDY06630	Canola	plastid	73.39	62.83
CDY28750	Canola	plastid	72.87	62.67
HORVU2Hr1G045900.2	Barley	plastid	73.13	62.2
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	70.03	61.17
Os07t0523400-01	Rice	plasma membrane	38.24	52.11
KRH02096	Soybean	plastid	77.52	49.67
CDY16905	Canola	plastid	44.7	43.14
CDY38448	Canola	plastid	44.44	42.79
CDY12390	Canola	plastid	34.88	33.58
CDY33455	Canola	plastid	35.14	33.42
CDY47555	Canola	plastid	34.88	33.17
CDX77632	Canola	plastid	35.14	33.01
CDY48790	Canola	mitochondrion	33.59	32.26
CDX74305	Canola	plastid	31.52	31.94
CDX91942	Canola	plastid	31.52	31.85
CDY04362	Canola	plastid	18.86	30.54
CDY53419	Canola	mitochondrion	34.11	25.68

Protein Annotations

MapMan:24.2.1.1.1	GO:A0A078IXZ8	UniProt:A0A078IXZ8	EnsemblPlants:CDY55220	ProteinID:CDY55220	ProteinID:CDY55220.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00016519001	PFAM:PF03151	PANTHER:PTHR43973
PANTHER:PTHR43973:SF1	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl
UniParc:UPI0004EE1EFE	SEG:seg	:	:	:	:

Description

BnaA01g36280DBnaA01g36280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IXZ8]

Coordinates

chrLK033384:-:18464..20358

Molecular Weight (calculated)

42612.3 Da

IEP (calculated)

10.120

GRAVY (calculated)

0.378

Length

387 amino acids

Sequence
(BLAST)

001: MISSVKPTPS SFSATSTGAR RSIPTKLHFS PLHIIKSCRN QSSNVSYQKP LHISSAQNFS SFKREVRVEA YEADRSRPLD INIELPDEQS AQKLKIGISF
101: ATWWALNVVF NIYNKKVLNA FPYPWLTSTL SLACGSLMML VSWASRIAEA PKTDLDFWKT LFPVAVAHTI GHVAATVSMS KVAVSFTHII KSGEPAFSVL
201: VSRFFLGETF PLPVYLSLLP IIGGCALAAV TELNFNMIGF MGAMISNLAF VFRNIFSKKG MKGKSVSGMN YYACLSMMSL LILTPFAIAV EGPKMWAAGW
301: ENAVSQIGPN FVWWVVAQSV FYHLYNQVSY MSLDQISPLT FSIGNTMKRI SVIVASIIIF HTPVQPVNAL GAAIAILGTF LYSQAKM

Best Arabidopsis Sequence Match ( AT1G61800.1 )
(BLAST)

001: MLSSIKPSSS SFSTAISGSV RRSIPTKLKF SPLLIIKNCH NQSFNANVVS HQKPLHISSA SNFKREVKVE AYEADRSRPL DINIELPDEQ SAQKLKIGIY
101: FATWWALNVV FNIYNKKVLN AFPYPWLTST LSLACGSLMM LVSWATRIAD APKTDLEFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFFMGET FPLPVYLSLL PIIGGCALAA ITELNFNITG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMMS LVILTPFSIA VEGPQMWAAG
301: WQNAVSQVGP NFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSIGNTMKR ISVIVASIII FHTPIQPVNA LGAAIAIFGT FLYSQAKQ

Arabidopsis Description

GPT2glucose-6-phosphate/phosphate translocator 2 [Source:TAIR;Acc:AT1G61800]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.