Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022660.1-P | Field mustard | cytosol | 83.33 | 97.01 |
| CDY28830 | Canola | cytosol | 83.33 | 97.01 |
| CDX96233 | Canola | cytosol | 83.33 | 97.01 |
| AT5G53560.1 | Thale cress | cytosol | 78.85 | 91.79 |
| PGSC0003DMT400047688 | Potato | cytosol | 69.23 | 80.6 |
| VIT_16s0098g01230.t01 | Wine grape | cytosol | 69.23 | 80.6 |
| CDY47080 | Canola | cytosol | 68.59 | 79.85 |
| KRH64355 | Soybean | endoplasmic reticulum | 70.51 | 78.57 |
| CDY20247 | Canola | mitochondrion | 93.59 | 76.84 |
| PGSC0003DMT400013956 | Potato | cytosol | 65.38 | 76.12 |
| EER91363 | Sorghum | cytosol | 62.82 | 73.13 |
| Os10t0518200-01 | Rice | plasma membrane, plastid | 48.08 | 72.12 |
| TraesCS1D01G184800.1 | Wheat | cytosol | 61.54 | 71.64 |
| TraesCS1A01G181500.1 | Wheat | cytosol, golgi | 60.9 | 70.9 |
| CDY23792 | Canola | cytosol | 57.69 | 67.16 |
| CDY19161 | Canola | cytosol | 57.05 | 66.42 |
| CDX84725 | Canola | cytosol | 57.05 | 66.42 |
| CDX79471 | Canola | cytosol | 57.05 | 66.42 |
| CDY59638 | Canola | cytosol | 55.77 | 64.93 |
| CDX86279 | Canola | cytosol | 55.13 | 62.32 |
| GSMUA_Achr1P04070_001 | Banana | cytosol | 52.56 | 61.65 |
| CDX85364 | Canola | cytosol | 54.49 | 61.59 |
| CDY19937 | Canola | cytosol | 53.85 | 60.0 |
| Solyc03g082600.2.1 | Tomato | plastid | 73.08 | 60.0 |
| Zm00001d032442_P002 | Maize | cytosol | 52.56 | 58.99 |
| GSMUA_Achr4P30410_001 | Banana | cytosol, extracellular, mitochondrion | 60.9 | 58.28 |
| KRH53581 | Soybean | endoplasmic reticulum | 72.44 | 57.95 |
| CDY00045 | Canola | cytosol | 51.92 | 57.86 |
| CDY12180 | Canola | cytosol | 56.41 | 56.41 |
| GSMUA_Achr11P... | Banana | cytosol | 46.15 | 54.55 |
| Zm00001d013839_P001 | Maize | plasma membrane | 62.82 | 53.85 |
| CDY47078 | Canola | nucleus | 39.1 | 51.69 |
| GSMUA_Achr4P27140_001 | Banana | cytosol | 49.36 | 49.68 |
| CDY61721 | Canola | cytosol | 42.31 | 49.25 |
| CDY27310 | Canola | cytosol | 42.31 | 49.25 |
| CDX80035 | Canola | cytosol | 40.38 | 47.01 |
| HORVU1Hr1G047990.4 | Barley | plastid | 60.26 | 46.77 |
| CDY41545 | Canola | cytosol | 39.74 | 46.27 |
| TraesCS1B01G199300.1 | Wheat | cytosol | 60.9 | 44.81 |
| CDY16153 | Canola | cytosol | 38.46 | 44.44 |
| CDX85016 | Canola | cytosol | 37.82 | 43.7 |
| CDY34133 | Canola | endoplasmic reticulum, extracellular, golgi | 22.44 | 28.69 |
| CDY24550 | Canola | extracellular, golgi, vacuole | 21.79 | 28.1 |
| CDY46984 | Canola | endoplasmic reticulum | 23.08 | 27.27 |
| CDY44610 | Canola | endoplasmic reticulum | 13.46 | 25.0 |
| CDY61511 | Canola | endoplasmic reticulum, golgi | 13.46 | 25.0 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | GO:A0A078FIV1 | UniProt:A0A078FIV1 | EnsemblPlants:CDY14370 | ProteinID:CDY14370 |
| ProteinID:CDY14370.1 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00078997001 |
| InterPro:IPR001199 | InterPro:IPR036400 | PFAM:PF00173 | PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 |
| PANTHER:PTHR19359 | PANTHER:PTHR19359:SF22 | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI0004EE750E |
Description
BnaA10g06850DBnaA10g06850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIV1]
Coordinates
chrLK032042:-:431787..434885
Molecular Weight (calculated)
17736.1 Da
IEP (calculated)
4.852
GRAVY (calculated)
-0.468
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MYTNKDVLNK QKDPPTFDLR REMASEKKVL GFEEVSQHNK TKDCWLIISG KVYDVTPFMD DHPGGDEVLL SSTGKDATND FEDVGHSDTA RDMMEKYYIG
101: EIDSSTVPAT RTYVAPVQPA YNQDKTPEFI IKILQFLVPI LILGLALVVR QYTKKE
101: EIDSSTVPAT RTYVAPVQPA YNQDKTPEFI IKILQFLVPI LILGLALVVR QYTKKE
001: MSSDRKVLSF EEVSKHNKTK DCWLIISGKV YDVTPFMDDH PGGDEVLLSS TGKDATNDFE DVGHSDTARD MMDKYFIGEI DSSSVPATRT YVAPQQPAYN
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
101: QDKTPEFIIK ILQFLVPILI LGLALVVRHY TKKD
Arabidopsis Description
CYTB5-ECB5-E [Source:UniProtKB/TrEMBL;Acc:A0A178USU5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.