Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021809.1-P | Field mustard | cytosol | 99.25 | 99.25 |
| CDY19161 | Canola | cytosol | 99.25 | 99.25 |
| CDX79471 | Canola | cytosol | 96.27 | 96.27 |
| CDX84725 | Canola | cytosol | 94.78 | 94.78 |
| AT2G32720.1 | Thale cress | cytosol | 94.03 | 94.03 |
| CDY59638 | Canola | cytosol | 93.28 | 93.28 |
| CDY12180 | Canola | cytosol | 94.03 | 80.77 |
| GSMUA_Achr3P19410_001 | Banana | cytosol | 77.61 | 77.61 |
| Os01t0971500-01 | Rice | cytosol, plasma membrane | 77.61 | 77.04 |
| EES02143 | Sorghum | cytosol | 76.12 | 75.56 |
| TraesCS5D01G152500.1 | Wheat | golgi | 74.63 | 74.63 |
| HORVU5Hr1G045040.1 | Barley | cytosol, plasma membrane | 74.63 | 74.63 |
| Os05t0108800-01 | Rice | plasma membrane | 76.12 | 74.45 |
| EES17559 | Sorghum | cytosol | 73.88 | 74.44 |
| TraesCS5B01G138200.1 | Wheat | cytosol, golgi | 73.88 | 73.88 |
| TraesCS5A01G138900.1 | Wheat | cytosol, golgi | 73.88 | 73.88 |
| TraesCS3D01G529500.1 | Wheat | cytosol, golgi, unclear | 75.37 | 73.72 |
| TraesCS3A01G524000.2 | Wheat | cytosol, golgi, plastid | 75.37 | 73.72 |
| GSMUA_Achr6P06700_001 | Banana | cytosol | 73.13 | 73.13 |
| CDY28830 | Canola | cytosol | 66.42 | 66.42 |
| CDX96233 | Canola | cytosol | 66.42 | 66.42 |
| CDX85364 | Canola | cytosol | 67.16 | 65.22 |
| CDX86279 | Canola | cytosol | 67.16 | 65.22 |
| CDY19937 | Canola | cytosol | 65.67 | 62.86 |
| CDY00045 | Canola | cytosol | 65.67 | 62.86 |
| CDY47080 | Canola | cytosol | 60.45 | 60.45 |
| HORVU3Hr1G114360.3 | Barley | plasma membrane | 76.87 | 59.54 |
| CDY14370 | Canola | cytosol | 67.16 | 57.69 |
| Solyc12g098320.1.1 | Tomato | cytosol | 25.37 | 47.89 |
| CDY20247 | Canola | mitochondrion | 66.42 | 46.84 |
| PGSC0003DMT400019916 | Potato | cytosol | 47.01 | 44.37 |
| CDY61721 | Canola | cytosol | 44.03 | 44.03 |
| CDY27310 | Canola | cytosol | 44.03 | 44.03 |
| CDY47078 | Canola | nucleus | 37.31 | 42.37 |
| CDX80035 | Canola | cytosol | 41.79 | 41.79 |
| CDY41545 | Canola | cytosol | 41.04 | 41.04 |
| CDX85016 | Canola | cytosol | 41.04 | 40.74 |
| CDY16153 | Canola | cytosol | 41.04 | 40.74 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 68.66 | 37.55 |
| CDY24550 | Canola | extracellular, golgi, vacuole | 25.37 | 28.1 |
| CDY34133 | Canola | endoplasmic reticulum, extracellular, golgi | 25.37 | 27.87 |
| CDY46984 | Canola | endoplasmic reticulum | 26.87 | 27.27 |
| CDY61511 | Canola | endoplasmic reticulum, golgi | 15.67 | 25.0 |
| CDY44610 | Canola | endoplasmic reticulum | 15.67 | 25.0 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | GO:A0A078GF95 | UniProt:A0A078GF95 | EnsemblPlants:CDY23792 | ProteinID:CDY23792 |
| ProteinID:CDY23792.1 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 | GO:GO:0046872 | EnsemblPlantsGene:GSBRNA2T00024154001 |
| InterPro:IPR001199 | InterPro:IPR036400 | PFAM:PF00173 | PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 |
| PANTHER:PTHR19359 | PANTHER:PTHR19359:SF66 | SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI0004EB29C6 |
| SEG:seg | : | : | : | : | : |
Description
BnaC04g43300DBnaC04g43300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GF95]
Coordinates
chrLK032148:+:599295..600614
Molecular Weight (calculated)
15141.9 Da
IEP (calculated)
4.817
GRAVY (calculated)
-0.415
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MGEEAKIFTL SEVSEHNHAH DCWIVINAKV YNVTKFLEDH PGGDEVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKTK YTPPKQPHYN
101: QDKTSEFIIK ILQFLVPIAI LGLAVGIRIY TKSE
101: QDKTSEFIIK ILQFLVPIAI LGLAVGIRIY TKSE
001: MGDEAKIFTL SEVSEHNQAH DCWIVINGKV YNVTKFLEDH PGGDDVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKVK YTPPKQPHYN
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
Arabidopsis Description
CYTB5-BCYTB5-D [Source:UniProtKB/TrEMBL;Acc:A0A178VXM5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.