Factsheet for Os01t0971500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 4
vacuole 1
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0125300-01	cytosol
Os12t0628400-01	cytosol, nucleus

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G32720.1	Os12t0628400-01	AT2G34770.1	19054355
AT2G32720.1	Os12t0628400-01	AT2G34770.1	22635113
AT2G32720.1	Os12t0628400-01	AT2G34770.1	22635113
AT2G32720.1	Os02t0125300-01	AT5G47120.1	19054355
AT2G32720.1	Os02t0125300-01	AT5G47120.1	19054355
AT5G48810.1	Os02t0125300-01	AT5G47120.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041963_P001	Maize	plasma membrane	92.59	92.59
EES02143	Sorghum	cytosol	92.59	92.59
Zm00001d011786_P001	Maize	plasma membrane	91.11	91.11
TraesCS5B01G138200.1	Wheat	cytosol, golgi	89.63	90.3
TraesCS5D01G152500.1	Wheat	golgi	88.89	89.55
TraesCS5A01G138900.1	Wheat	cytosol, golgi	88.89	89.55
Os05t0108800-01	Rice	plasma membrane	90.37	89.05
HORVU5Hr1G045040.1	Barley	cytosol, plasma membrane	88.15	88.81
GSMUA_Achr3P19410_001	Banana	cytosol	82.22	82.84
AT2G32720.1	Thale cress	cytosol	78.52	79.1
GSMUA_Achr6P06700_001	Banana	cytosol	78.52	79.1
KRG99574	Soybean	cytosol, endoplasmic reticulum	78.52	78.52
Bra022898.1-P	Field mustard	cytosol	77.78	78.36
PGSC0003DMT400051945	Potato	cytosol	76.3	78.03
CDX84725	Canola	cytosol	77.04	77.61
CDX79471	Canola	cytosol	77.04	77.61
CDY23792	Canola	cytosol	77.04	77.61
VIT_07s0005g06290.t01	Wine grape	cytosol	76.3	77.44
KRH66053	Soybean	endoplasmic reticulum	77.04	77.04
CDY19161	Canola	cytosol	76.3	76.87
Bra021809.1-P	Field mustard	cytosol	76.3	76.87
Bra005564.1-P	Field mustard	cytosol	76.3	76.87
CDY59638	Canola	cytosol	75.56	76.12
PGSC0003DMT400045531	Potato	cytosol	73.33	74.44
PGSC0003DMT400003091	Potato	cytosol	72.59	72.59
KRG99780	Soybean	cytosol	68.89	67.39
CDX85364	Canola	cytosol	68.15	66.67
CDY12180	Canola	cytosol	75.56	65.38
CDX86279	Canola	cytosol	66.67	65.22
Bra036160.1-P	Field mustard	cytosol	67.41	65.0
CDY19937	Canola	cytosol	67.41	65.0
KRH46744	Soybean	endoplasmic reticulum	68.15	64.79
Bra037461.1-P	Field mustard	cytosol	65.93	64.49
CDY00045	Canola	cytosol	65.19	62.86
AT5G48810.1	Thale cress	cytosol	64.44	62.14
Os10t0518200-01	Rice	plasma membrane, plastid	46.67	60.58
Solyc06g053180.2.1	Tomato	plastid	33.33	52.94
Os02t0649800-01	Rice	plasma membrane	44.44	43.48
PGSC0003DMT400019916	Potato	cytosol	43.7	41.55
Os12t0223300-01	Rice	cytosol, peroxisome, plastid	44.44	40.0
GSMUA_AchrUn_...	Banana	mitochondrion	71.85	39.59
Os09t0334600-00	Rice	mitochondrion	20.74	31.82
Os08t0386300-02	Rice	endoplasmic reticulum, extracellular	21.48	24.37

Protein Annotations

MapMan:21.9.1.7.1.3	Gene3D:3.10.120.10	EntrezGene:4323846	EMBL:AK120840	ProteinID:BAB63673.1	ProteinID:BAF07448.1
ProteinID:BAS76430.1	InterPro:Cyt_B5-like_heme/steroid-bd	InterPro:Cyt_B5-like_heme/steroid_sf	InterPro:Cyt_B5_heme-BS	ProteinID:EAZ14988.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0020037	GO:GO:0046872
InterPro:IPR001199	InterPro:IPR036400	EnsemblPlantsGene:Os01g0971500	EnsemblPlants:Os01t0971500-01	PFAM:PF00173	PRINTS:PR00363
ScanProsite:PS00191	PFscan:PS50255	PANTHER:PTHR19359	PANTHER:PTHR19359:SF66	UniProt:Q94DH6	SMART:SM01117
SUPFAM:SSF55856	TMHMM:TMhelix	UniParc:UPI00000A2D17	RefSeq:XP_015640800.1	:	:

Description

Similar to Cytochrome b5. (Os01t0971500-01)

Coordinates

chr1:+:42858783..42860399

Molecular Weight (calculated)

15019.8 Da

IEP (calculated)

4.919

GRAVY (calculated)

-0.296

Length

135 amino acids

Sequence
(BLAST)

001: MSNNKVLTLE EVSKHNTKDD CWLIIGGKVY NVTKFLEDHP GGDDVLLSST AKDATDDFED VGHSTTARAM MDEYYVGDID ATTIPTKVKY TPPKQPHYNQ
101: DKTPEFIIKI LQFLVPLAIL GLAVAVRIYT KSESA

Best Arabidopsis Sequence Match ( AT2G32720.1 )
(BLAST)

001: MGDEAKIFTL SEVSEHNQAH DCWIVINGKV YNVTKFLEDH PGGDDVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKVK YTPPKQPHYN
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG

Arabidopsis Description

CYTB5-BCYTB5-D [Source:UniProtKB/TrEMBL;Acc:A0A178VXM5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.