Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- vacuole 1
- peroxisome 1
- plasma membrane 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES15848 | Sorghum | cytosol | 77.33 | 78.91 |
| Zm00001d023978_P001 | Maize | cytosol | 68.0 | 77.86 |
| TraesCS7B01G336600.1 | Wheat | cytosol | 75.33 | 75.84 |
| TraesCS7A01G437700.1 | Wheat | cytosol | 74.67 | 75.17 |
| GSMUA_Achr3P16820_001 | Banana | cytosol | 53.33 | 57.97 |
| GSMUA_Achr6P28600_001 | Banana | cytosol, golgi, peroxisome | 51.33 | 57.04 |
| HORVU7Hr1G100040.1 | Barley | plastid | 76.67 | 56.93 |
| TraesCS7D01G427500.1 | Wheat | mitochondrion, plastid | 75.33 | 50.67 |
| Os01t0971500-01 | Rice | cytosol, plasma membrane | 40.0 | 44.44 |
| Os10t0518200-01 | Rice | plasma membrane, plastid | 30.0 | 43.27 |
| Os05t0108800-01 | Rice | plasma membrane | 39.33 | 43.07 |
| VIT_18s0001g09400.t01 | Wine grape | mitochondrion | 36.67 | 37.41 |
| KRH61382 | Soybean | cytosol | 33.33 | 35.97 |
| KRH52065 | Soybean | cytosol | 32.67 | 35.77 |
| Os02t0649800-01 | Rice | plasma membrane | 32.0 | 34.78 |
| PGSC0003DMT400055458 | Potato | cytosol | 31.33 | 31.97 |
| Os09t0334600-00 | Rice | mitochondrion | 18.67 | 31.82 |
| Solyc04g078140.2.1 | Tomato | cytosol | 30.67 | 31.08 |
| Os08t0386300-02 | Rice | endoplasmic reticulum, extracellular | 18.67 | 23.53 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | EntrezGene:4351805 | ProteinID:ABA96777.1 | ProteinID:ABA96778.1 | EMBL:AK060133 |
| ProteinID:BAF29440.1 | ProteinID:BAT16385.1 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | ProteinID:EAZ20004.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 |
| GO:GO:0046872 | InterPro:IPR001199 | InterPro:IPR036400 | EnsemblPlantsGene:Os12g0223300 | EnsemblPlants:Os12t0223300-01 | PFAM:PF00173 |
| PRINTS:PR00363 | ScanProsite:PS00191 | PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF39 | UniProt:Q2QVN9 |
| SMART:SM01117 | SUPFAM:SSF55856 | TMHMM:TMhelix | UniParc:UPI000068178E | RefSeq:XP_015618253.1 | SEG:seg |
Description
Similar to Outer membrane cytochrome b(5) (Fragment). (Os12t0223300-01);Similar to Cytochrome b5. (Os12t0223300-02)
Coordinates
chr12:+:6677664..6679751
Molecular Weight (calculated)
16165.1 Da
IEP (calculated)
5.141
GRAVY (calculated)
-0.023
Length
150 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDEAASAK KLFSASDVVG HASRKDCWVV IHGKVYDVTK FLEDHPGGED VLLHASASGD ATEAFEDVGH STSAISMMNN YLIGSIKDYV PPSASEATTI
101: GGNDVPPNFR RMPQKKGPPA PNTFLDFLLP LFVLGLAFAA WYYLTFIAKA
101: GGNDVPPNFR RMPQKKGPPA PNTFLDFLLP LFVLGLAFAA WYYLTFIAKA
001: MGGDGKVFTL SEVSQHSSAK DCWIVIDGKV YDVTKFLDDH PGGDEVILTS TGKDATDDFE DVGHSSTAKA MLDEYYVGDI DTATVPVKAK FVPPTSTKAV
101: ATQDKSSDFV IKLLQFLVPL LILGLAFGIR YYTKTKAPSS
101: ATQDKSSDFV IKLLQFLVPL LILGLAFGIR YYTKTKAPSS
Arabidopsis Description
CYTB5-DCytochrome B5 isoform D [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWT2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.