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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • cytosol 2
  • vacuole 1
  • mitochondrion 4
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plasma membrane, vacuole
BaCelLo:cytosol
EpiLoc:vacuole
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH61382 Soybean cytosol 65.31 69.06
KRH52065 Soybean cytosol 63.95 68.61
PGSC0003DMT400055458 Potato cytosol 65.31 65.31
Solyc04g078140.2.1 Tomato cytosol 62.59 62.16
GSMUA_Achr10P... Banana cytosol, mitochondrion, nucleus 50.34 49.66
VIT_16s0098g01230.t01 Wine grape cytosol 38.78 42.54
VIT_07s0005g06290.t01 Wine grape cytosol 38.1 42.11
EES15848 Sorghum cytosol 37.41 37.41
Os12t0223300-01 Rice cytosol, peroxisome, plastid 37.41 36.67
VIT_01s0011g00210.t01 Wine grape cytosol 33.33 36.57
Zm00001d023978_P001 Maize cytosol 30.61 34.35
TraesCS7B01G336600.1 Wheat cytosol 34.69 34.23
TraesCS7A01G437700.1 Wheat cytosol 34.01 33.56
VIT_09s0002g03420.t01 Wine grape cytosol 18.37 27.55
HORVU7Hr1G100040.1 Barley plastid 34.69 25.25
TraesCS7D01G427500.1 Wheat mitochondrion, plastid 34.69 22.87
Protein Annotations
EntrezGene:100264345wikigene:100264345MapMan:21.9.1.7.1.3Gene3D:3.10.120.10UniProt:A5B9D6EMBL:AM451154
ProteinID:CAN63256ProteinID:CAN63256.1ProteinID:CBI19429ProteinID:CBI19429.3InterPro:Cyt_B5-like_heme/steroid-bdInterPro:Cyt_B5-like_heme/steroid_sf
InterPro:Cyt_B5_heme-BSEMBL:FN595227GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0016020
GO:GO:0016021GO:GO:0020037GO:GO:0046872InterPro:IPR001199InterPro:IPR036400EntrezGene:LOC100264345
wikigene:LOC100264345PFAM:PF00173PRINTS:PR00363ScanProsite:PS00191PFscan:PS50255PANTHER:PTHR19359
PANTHER:PTHR19359:SF29SMART:SM01117SUPFAM:SSF55856TIGR:TC62178TMHMM:TMhelixUniParc:UPI00015206EE
ArrayExpress:VIT_18s0001g09400EnsemblPlantsGene:VIT_18s0001g09400EnsemblPlants:VIT_18s0001g09400.t01unigene:Vvi.8037RefSeq:XP_002285164RefSeq:XP_002285164.1
Description
No Description!
Coordinates
chr18:-:7880335..7881000
Molecular Weight (calculated)
16287.4 Da
IEP (calculated)
7.072
GRAVY (calculated)
-0.174
Length
147 amino acids
Sequence
(BLAST)
001: MAPQKVFTLS QVAQHKSKTD CWFVIHGRVL DVTKFLEEHP GGEEVLVESA GKDATKDFED IGHSKAAQNL LLKYQVGVLQ GYNIQDGAAS TKDAPYKETK
101: TKEMSAFVIK NDSTPTYAAL LEFLVPLLVA GFFFGYRYLS RAAHLTT
Best Arabidopsis Sequence Match ( AT5G48810.1 )
(BLAST)
001: MGGDGKVFTL SEVSQHSSAK DCWIVIDGKV YDVTKFLDDH PGGDEVILTS TGKDATDDFE DVGHSSTAKA MLDEYYVGDI DTATVPVKAK FVPPTSTKAV
101: ATQDKSSDFV IKLLQFLVPL LILGLAFGIR YYTKTKAPSS
Arabidopsis Description
CYTB5-DCytochrome B5 isoform D [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWT2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.