Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400055458 | Potato | cytosol | 91.89 | 92.52 |
| VIT_18s0001g09400.t01 | Wine grape | mitochondrion | 62.16 | 62.59 |
| KRH52065 | Soybean | cytosol | 55.41 | 59.85 |
| KRH61382 | Soybean | cytosol | 55.41 | 58.99 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus | 44.59 | 44.3 |
| Solyc09g061230.2.1 | Tomato | cytosol | 33.11 | 36.84 |
| Solyc06g083440.2.1 | Tomato | cytosol | 32.43 | 36.09 |
| Solyc05g012080.2.1 | Tomato | cytosol, plastid | 31.76 | 35.34 |
| Solyc12g098320.1.1 | Tomato | cytosol | 16.89 | 35.21 |
| Solyc06g007930.2.1 | Tomato | cytosol, endoplasmic reticulum, plastid, unclear | 31.76 | 34.81 |
| Solyc12g008470.1.1 | Tomato | mitochondrion | 19.59 | 34.52 |
| Solyc06g053170.2.1 | Tomato | cytosol, plastid | 8.78 | 33.33 |
| EES15848 | Sorghum | cytosol | 32.43 | 32.65 |
| TraesCS7A01G437700.1 | Wheat | cytosol | 31.08 | 30.87 |
| TraesCS7B01G336600.1 | Wheat | cytosol | 31.08 | 30.87 |
| Os12t0223300-01 | Rice | cytosol, peroxisome, plastid | 31.08 | 30.67 |
| Zm00001d023978_P001 | Maize | cytosol | 24.32 | 27.48 |
| Solyc03g082600.2.1 | Tomato | plastid | 31.76 | 24.74 |
| HORVU7Hr1G100040.1 | Barley | plastid | 29.73 | 21.78 |
| TraesCS7D01G427500.1 | Wheat | mitochondrion, plastid | 31.76 | 21.08 |
| Solyc06g053180.2.1 | Tomato | plastid | 10.81 | 18.82 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 | GO:GO:0046872 |
| InterPro:IPR001199 | InterPro:IPR036400 | UniProt:K4BUQ1 | PFAM:PF00173 | PRINTS:PR00363 | ScanProsite:PS00191 |
| PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF29 | SMART:SM01117 | SUPFAM:SSF55856 | EnsemblPlantsGene:Solyc04g078140.2 |
| EnsemblPlants:Solyc04g078140.2.1 | TMHMM:TMhelix | UniParc:UPI0002766867 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4:-:62965957..62967201
Molecular Weight (calculated)
17211.5 Da
IEP (calculated)
5.931
GRAVY (calculated)
-0.385
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTEKIFTLS QVAQHKSKQD CWIIIHGRII DVTKFLEEHP GGEEVLIESA GKDATKEFED IGHSKAAKNY ILKYQIGNLQ GYKIQDDDDD DNLFTHSNKE
101: PIKAKEIEAF VIKQNFKPKH LFFFEYFVPF LAAAFFLYYR YLNGALQL
101: PIKAKEIEAF VIKQNFKPKH LFFFEYFVPF LAAAFFLYYR YLNGALQL
001: MGGDGKVFTL SEVSQHSSAK DCWIVIDGKV YDVTKFLDDH PGGDEVILTS TGKDATDDFE DVGHSSTAKA MLDEYYVGDI DTATVPVKAK FVPPTSTKAV
101: ATQDKSSDFV IKLLQFLVPL LILGLAFGIR YYTKTKAPSS
101: ATQDKSSDFV IKLLQFLVPL LILGLAFGIR YYTKTKAPSS
Arabidopsis Description
CYTB5-DCytochrome B5 isoform D [Source:UniProtKB/Swiss-Prot;Acc:Q9ZWT2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.