Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- vacuole 1
- endoplasmic reticulum 1
- mitochondrion 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc01g090000.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G48810.1 | Solyc01g090000.1.1 | AT5G47120.1 | 19054355 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400051945 | Potato | cytosol | 97.74 | 98.48 |
| Solyc06g007930.2.1 | Tomato | cytosol, endoplasmic reticulum, plastid, unclear | 83.46 | 82.22 |
| Solyc09g061230.2.1 | Tomato | cytosol | 81.2 | 81.2 |
| VIT_07s0005g06290.t01 | Wine grape | cytosol | 80.45 | 80.45 |
| KRG99780 | Soybean | cytosol | 72.93 | 70.29 |
| CDX85364 | Canola | cytosol | 69.92 | 67.39 |
| KRH46744 | Soybean | endoplasmic reticulum | 71.43 | 66.9 |
| CDX86279 | Canola | cytosol | 69.17 | 66.67 |
| Bra037461.1-P | Field mustard | cytosol | 68.42 | 65.94 |
| CDY19937 | Canola | cytosol | 68.42 | 65.0 |
| AT5G48810.1 | Thale cress | cytosol | 68.42 | 65.0 |
| Bra036160.1-P | Field mustard | cytosol | 68.42 | 65.0 |
| CDY00045 | Canola | cytosol | 67.67 | 64.29 |
| Solyc06g053170.2.1 | Tomato | cytosol, plastid | 15.79 | 53.85 |
| Solyc12g098320.1.1 | Tomato | cytosol | 27.07 | 50.7 |
| Solyc06g053180.2.1 | Tomato | plastid | 30.08 | 47.06 |
| Solyc03g082600.2.1 | Tomato | plastid | 66.92 | 46.84 |
| Solyc05g012080.2.1 | Tomato | cytosol, plastid | 39.85 | 39.85 |
| Solyc12g008470.1.1 | Tomato | mitochondrion | 24.06 | 38.1 |
| Zm00001d035685_P001 | Maize | mitochondrion | 39.85 | 34.19 |
| Solyc04g078140.2.1 | Tomato | cytosol | 36.09 | 32.43 |
Protein Annotations
| MapMan:21.9.1.7.1.3 | Gene3D:3.10.120.10 | InterPro:Cyt_B5-like_heme/steroid-bd | InterPro:Cyt_B5-like_heme/steroid_sf | InterPro:Cyt_B5_heme-BS | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0020037 | GO:GO:0046872 |
| InterPro:IPR001199 | InterPro:IPR036400 | UniProt:K4CAJ9 | PFAM:PF00173 | PRINTS:PR00363 | ScanProsite:PS00191 |
| PFscan:PS50255 | PANTHER:PTHR19359 | PANTHER:PTHR19359:SF69 | SMART:SM01117 | SUPFAM:SSF55856 | EnsemblPlantsGene:Solyc06g083440.2 |
| EnsemblPlants:Solyc06g083440.2.1 | TMHMM:TMhelix | UniParc:UPI0002765DE6 | : | : | : |
Description
No Description!
Coordinates
chr6:+:48844673..48846744
Molecular Weight (calculated)
14702.3 Da
IEP (calculated)
4.868
GRAVY (calculated)
-0.251
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKVFNLAEV SQHNNAKDCW LIISGKVYDV TKFLEDHPGG DDVLLSATGK DATDDFEDVG HSSSARAMLD EYYVGEIDSS TIPTSVKYTP PKQPHYNQDK
101: TTEFIIKILQ FLVPLIILGG AVGLRFYTKQ STS
101: TTEFIIKILQ FLVPLIILGG AVGLRFYTKQ STS
001: MGDEAKIFTL SEVSEHNQAH DCWIVINGKV YNVTKFLEDH PGGDDVLLSS TGKDATDDFE DVGHSESARE MMEQYYVGEI DPTTIPKKVK YTPPKQPHYN
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
101: QDKTSEFIIK LLQFLVPLAI LGLAVGIRIY TKSG
Arabidopsis Description
CYTB5-BCYTB5-D [Source:UniProtKB/TrEMBL;Acc:A0A178VXM5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.