Factsheet for Solyc01g090000.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g011700.1.1
Solyc03g082600.2.1
Solyc05g012080.2.1
Solyc05g046330.2.1	endoplasmic reticulum
Solyc06g007930.2.1
Solyc06g053170.2.1
Solyc06g063330.2.1
Solyc06g083440.2.1
Solyc07g014700.2.1	endoplasmic reticulum
Solyc09g061230.2.1
Solyc12g055800.1.1
Solyc12g098320.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47120.1	Solyc05g012080.2.1	AT1G26340.1	19054355
AT5G47120.1	Solyc06g063330.2.1	AT1G78900.1	23782494
AT5G47120.1	Solyc12g055800.1.1	AT1G78900.1	23782494
AT5G47120.1	Solyc02g011700.1.1	AT2G18960.1	23782494
AT5G47120.1	Solyc12g098320.1.1	AT2G32720.1	19054355
AT5G47120.1	Solyc06g053170.2.1	AT2G46650.1	19054355
AT5G47120.1	Solyc05g046330.2.1	AT4G21150.1	23782494
AT5G47120.1	Solyc07g014700.2.1	AT4G21150.1	23782494
AT5G47120.1	Solyc05g046330.2.1	AT4G21150.1	23782494
AT5G47120.1	Solyc07g014700.2.1	AT4G21150.1	23782494
AT5G47120.1	Solyc06g007930.2.1	AT5G48810.1	19054355
AT5G47120.1	Solyc06g083440.2.1	AT5G48810.1	19054355
AT5G47120.1	Solyc09g061230.2.1	AT5G48810.1	19054355
AT5G47120.1	Solyc03g082600.2.1	AT5G53560.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25984	Canola	plasma membrane	28.75	27.94
Solyc08g077980.2.1	Tomato	plasma membrane	28.75	27.71
AT5G47120.1	Thale cress	plasma membrane	28.33	27.53
Bra017502.1-P	Field mustard	plasma membrane	27.92	27.13
CDY43441	Canola	plasma membrane	27.92	27.13
Bra022106.1-P	Field mustard	plasma membrane	27.08	26.32
CDY40569	Canola	plasma membrane	27.08	26.32
GSMUA_Achr7P07470_001	Banana	plasma membrane	26.25	26.14
TraesCS6D01G077000.1	Wheat	plasma membrane	26.67	25.91
TraesCS6B01G113900.1	Wheat	plasma membrane	26.67	25.91
CDY28973	Canola	plasma membrane	26.67	25.91
TraesCS6A01G083200.1	Wheat	peroxisome, plasma membrane, plastid, vacuole	26.67	25.91
Zm00001d053952_P001	Maize	plasma membrane	27.92	25.87
Os02t0125300-01	Rice	plasma membrane	25.83	24.9
EES04425	Sorghum	plastid	26.67	24.81
GSMUA_Achr6P36970_001	Banana	plasma membrane	25.42	24.5
AT5G47130.2	Thale cress	endoplasmic reticulum, extracellular, golgi	21.67	23.01
EER89024	Sorghum	plasma membrane	23.33	22.31
Bra024963.1-P	Field mustard	endoplasmic reticulum, golgi	8.75	22.11
Zm00001d045618_P001	Maize	plasma membrane	22.92	22.0
AT4G17580.1	Thale cress	plasma membrane	22.5	21.86
CDY33515	Canola	endoplasmic reticulum, golgi	8.33	21.05
Zm00001d015091_P003	Maize	mitochondrion, nucleus, peroxisome, plasma membrane	28.33	20.61
HORVU6Hr1G014450.1	Barley	nucleus	26.67	20.45
TraesCS1D01G018500.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	23.75	19.72

Protein Annotations

EnsemblPlants:Solyc01g090000.1.1	EnsemblPlantsGene:Solyc01g090000.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:Bax_inhibitor_1-related
PANTHER:PTHR23291	PANTHER:PTHR23291:SF34	TMHMM:TMhelix	UniParc:UPI0002761B68	UniProt:K4AYU1	MapMan:27.2.6

Description

No Description!

Coordinates

chr1:-:83714211..83715977

Molecular Weight (calculated)

27863.6 Da

IEP (calculated)

9.223

GRAVY (calculated)

0.541

Length

240 amino acids

Sequence
(BLAST)

001: MNAVRAYFNR GWRIDDMKNT GYLYPHIHKH LKYMYCTLFC TLLSSTVGSS FHYIWNIGGL FTLLIASGTI FFLFTTPPLE RKKRVCLLIT GAFFIGASIG
101: LLTKYLFGID QGFVINILAC TTIDFGTFWV RSLLIRDRSL CNCWWLVILM FFWFAFASDI FGGHSARWMV QVWSLLALYM LFISVYSKEV MNDSLYGEVD
201: YVNRACTNLF HLPAVMVHFV RVQVAGMLES FNRCMRLLNR

Best Arabidopsis Sequence Match ( AT5G47120.1 )
(BLAST)

001: MDAFSSFFDS QPGSRSWSYD SLKNFRQISP AVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIG CIGTMIWLLS CPPYEHQKRL SLLFVSAVLE
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN

Arabidopsis Description

BI-1Bax inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.