CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 1
peroxisome 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	golgi, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
EER90164
EER91363
EER93435
EES02143
EES04615
EES11577
EES17559
OQU85747
OQU88089	endoplasmic reticulum

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47120.1	EER93435	AT1G26340.1	19054355
AT5G47120.1	EER90164	AT1G78900.1	23782494
AT5G47120.1	EES04615	AT1G78900.1	23782494
AT5G47120.1	EES11577	AT2G18960.1	23782494
AT5G47120.1	EES02143	AT2G32720.1	19054355
AT5G47120.1	EES17559	AT2G32720.1	19054355
AT5G47120.1	OQU85747	AT2G46650.1	19054355
AT5G47120.1	OQU88089	AT4G21150.1	23782494
AT5G47120.1	OQU88089	AT4G21150.1	23782494
AT5G47120.1	EES02143	AT5G48810.1	19054355
AT5G47120.1	EES17559	AT5G48810.1	19054355
AT5G47120.1	EER91363	AT5G53560.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053952_P001	Maize	plasma membrane	91.86	91.51
Os02t0125300-01	Rice	plasma membrane	84.5	87.55
TraesCS6D01G077000.1	Wheat	plasma membrane	82.95	86.64
TraesCS6B01G113900.1	Wheat	plasma membrane	82.95	86.64
TraesCS6A01G083200.1	Wheat	peroxisome, plasma membrane, plastid, vacuole	82.56	86.23
GSMUA_Achr7P07470_001	Banana	plasma membrane	72.87	78.01
CDY33515	Canola	endoplasmic reticulum, golgi	26.36	71.58
AT5G47120.1	Thale cress	plasma membrane	68.22	71.26
EER89024	Sorghum	plasma membrane	68.99	70.92
Bra022106.1-P	Field mustard	plasma membrane	67.83	70.85
Bra024963.1-P	Field mustard	endoplasmic reticulum, golgi	25.97	70.53
CDY43441	Canola	plasma membrane	67.44	70.45
CDY25984	Canola	plasma membrane	67.44	70.45
Bra017502.1-P	Field mustard	plasma membrane	67.44	70.45
CDY28973	Canola	plasma membrane	67.44	70.45
CDY40569	Canola	plasma membrane	67.05	70.04
VIT_00s1665g00010.t01	Wine grape	golgi, plasma membrane, vacuole	57.36	68.52
HORVU6Hr1G014450.1	Barley	nucleus	82.56	68.05
PGSC0003DMT400067509	Potato	plasma membrane	64.73	67.34
KRH77301	Soybean	plasma membrane	63.57	67.21
Solyc08g077980.2.1	Tomato	plasma membrane	64.73	67.07
KRH57502	Soybean	plasma membrane	61.63	64.37
KRH04210	Soybean	plasma membrane	57.75	60.57
KRH28186	Soybean	peroxisome	62.79	59.12
AT4G17580.1	Thale cress	plasma membrane	48.84	51.01
AT5G47130.2	Thale cress	endoplasmic reticulum, extracellular, golgi	43.41	49.56
KRH24687	Soybean	extracellular	20.16	44.07
Solyc01g090000.1.1	Tomato	plasma membrane	24.81	26.67

Protein Annotations

EnsemblPlants:EES04425	EnsemblPlantsGene:SORBI_3004G024200	EntrezGene:8055067	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Bax_inhibitor_1-related	PANTHER:PTHR23291	PANTHER:PTHR23291:SF76	PFAM:PF01027	ProteinID:EES04425	ProteinID:EES04425.1
RefSeq:XP_002451449.1	SEG:seg	TMHMM:TMhelix	unigene:Sbi.1164	UniParc:UPI000189DA0F	UniProt:C5XT65
MapMan:27.2.6	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:1975586..1979504

Molecular Weight (calculated)

28130.4 Da

IEP (calculated)

8.554

GRAVY (calculated)

0.521

Length

258 amino acids

Sequence
(BLAST)

001: MDAFYSTSSS SSSSGPYGAA AYGGSGWGYD SLKNFRQISP AVQTHLKLVY LTLCVALASS ALGAYLHVVW NIGGMLTMLG CVGSIAWLFS VPVYEERKRY
101: GLLMAAALLE GASVGPLIKL AVEFDPSILV TAFVGTAIAF ACFSCAAVVA KRREYLYLGG LLSSGLSILL WLQFAASIFG HSTSTFMFEV YFGLLIFLGY
201: MVYDTQEIIE RAHHGDMDYI KHALTLFTDF VAVLVRILVI MLKNAADKSE DKKRKKRS

Best Arabidopsis Sequence Match ( AT5G47120.1 )
(BLAST)

001: MDAFSSFFDS QPGSRSWSYD SLKNFRQISP AVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIG CIGTMIWLLS CPPYEHQKRL SLLFVSAVLE
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN

Arabidopsis Description

BI-1Bax inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.