Factsheet for VIT_00s1665g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plasma membrane, vacuole

Predictor Summary:

extracellular 5
golgi 6
plasma membrane 6
endoplasmic reticulum 5
vacuole 6
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0011g00210.t01
VIT_01s0011g01030.t01
VIT_02s0012g00950.t01
VIT_07s0005g03640.t01	endoplasmic reticulum
VIT_07s0005g06290.t01
VIT_09s0054g00890.t01
VIT_16s0098g01230.t01
VIT_19s0090g00010.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G47120.1	VIT_01s0011g00210.t01	AT1G26340.1	19054355
AT5G47120.1	VIT_09s0054g00890.t01	AT1G78900.1	23782494
AT5G47120.1	VIT_01s0011g01030.t01	AT2G18960.1	23782494
AT5G47120.1	VIT_02s0012g00950.t01	AT2G18960.1	23782494
AT5G47120.1	VIT_19s0090g00010.t01	AT2G18960.1	23782494
AT5G47120.1	VIT_07s0005g03640.t01	AT4G21150.1	23782494
AT5G47120.1	VIT_07s0005g03640.t01	AT4G21150.1	23782494
AT5G47120.1	VIT_07s0005g06290.t01	AT5G48810.1	19054355
AT5G47120.1	VIT_16s0098g01230.t01	AT5G53560.1	19054355

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33515	Canola	endoplasmic reticulum, golgi	34.26	77.89
Bra024963.1-P	Field mustard	endoplasmic reticulum, golgi	33.8	76.84
Solyc08g077980.2.1	Tomato	plasma membrane	80.09	69.48
PGSC0003DMT400067509	Potato	plasma membrane	79.63	69.35
AT5G47120.1	Thale cress	plasma membrane	76.85	67.21
CDY28973	Canola	plasma membrane	76.85	67.21
Bra022106.1-P	Field mustard	plasma membrane	76.39	66.8
CDY40569	Canola	plasma membrane	75.93	66.4
KRH57502	Soybean	plasma membrane	75.93	66.4
KRH77301	Soybean	plasma membrane	75.0	66.39
Bra017502.1-P	Field mustard	plasma membrane	75.46	65.99
CDY43441	Canola	plasma membrane	75.46	65.99
CDY25984	Canola	plasma membrane	75.46	65.99
GSMUA_Achr7P07470_001	Banana	plasma membrane	70.83	63.49
KRH04210	Soybean	plasma membrane	69.44	60.98
KRH28186	Soybean	peroxisome	74.54	58.76
TraesCS6B01G113900.1	Wheat	plasma membrane	67.13	58.7
TraesCS6A01G083200.1	Wheat	peroxisome, plasma membrane, plastid, vacuole	67.13	58.7
TraesCS6D01G077000.1	Wheat	plasma membrane	66.67	58.3
EES04425	Sorghum	plastid	68.52	57.36
GSMUA_Achr6P36970_001	Banana	plasma membrane	65.74	57.03
Os02t0125300-01	Rice	plasma membrane	65.74	57.03
Zm00001d045618_P001	Maize	plasma membrane	65.28	56.4
Zm00001d053952_P001	Maize	plasma membrane	67.59	56.37
EER89024	Sorghum	plasma membrane	63.89	54.98
KRH24687	Soybean	extracellular	27.78	50.85
AT4G17580.1	Thale cress	plasma membrane	54.63	47.77
AT5G47130.2	Thale cress	endoplasmic reticulum, extracellular, golgi	49.07	46.9
HORVU6Hr1G014450.1	Barley	nucleus	66.67	46.01
Zm00001d015091_P003	Maize	mitochondrion, nucleus, peroxisome, plasma membrane	67.59	44.24
TraesCS1D01G018500.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	49.54	37.02

Protein Annotations

EntrezGene:100241557	wikigene:100241557	MapMan:27.2.6	ProteinID:AFM43629	ProteinID:AFM43629.1	EMBL:AM487249
InterPro:Bax_inhibitor_1-related	ProteinID:CAN77748	ProteinID:CAN77748.1	ProteinID:CCB62970	ProteinID:CCB62970.1	ncoils:Coil
UniProt:F6I7Q1	EMBL:FN596911	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EMBL:JQ863362
EntrezGene:LOC100241557	wikigene:LOC100241557	PFAM:PF01027	PANTHER:PTHR23291	PANTHER:PTHR23291:SF76	TIGR:TC58431
TMHMM:TMhelix	UniParc:UPI0002108F26	ArrayExpress:VIT_00s1665g00010	EnsemblPlantsGene:VIT_00s1665g00010	EnsemblPlants:VIT_00s1665g00010.t01	SEG:seg

Description

No Description!

Coordinates

chrUn:+:40069972..40072853

Molecular Weight (calculated)

23783.7 Da

IEP (calculated)

8.867

GRAVY (calculated)

0.806

Length

216 amino acids

Sequence
(BLAST)

001: MIFLILQVYL SLCCALIASA AGAYLHLLWN IGGLLTTFAC FGSIIWLLSA PSYEEKKRVS LLMAVALFQG ASIGPLIDLA IEIDPSILVS AFVGTAVAFG
101: CFSAAAMLAR RREYLYLGGV LSSGLSILFW LHFASSLFGG STAIFKFELY FGLLVFVGYM VVDTQDIIEK AHLGDRDYVK HSLLLFTDFA AVFVRILIIM
201: LKNSAEKSEK KKKRRN

Best Arabidopsis Sequence Match ( AT5G47120.1 )
(BLAST)

001: MDAFSSFFDS QPGSRSWSYD SLKNFRQISP AVQNHLKRVY LTLCCALVAS AFGAYLHVLW NIGGILTTIG CIGTMIWLLS CPPYEHQKRL SLLFVSAVLE
101: GASVGPLIKV AIDVDPSILI TAFVGTAIAF VCFSAAAMLA RRREYLYLGG LLSSGLSMLM WLQFASSIFG GSASIFKFEL YFGLLIFVGY MVVDTQEIIE
201: KAHLGDMDYV KHSLTLFTDF VAVFVRILII MLKNSADKEE KKKKRRN

Arabidopsis Description

BI-1Bax inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LD45]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.