Factsheet for VIT_02s0012g00950.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0011g01030.t01
VIT_02s0012g00950.t01
VIT_19s0014g02640.t01
VIT_19s0090g00010.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18960.1	VIT_01s0011g01030.t01	AT2G18960.1	12182706
AT2G18960.1	VIT_02s0012g00950.t01	AT2G18960.1	12182706
AT2G18960.1	VIT_19s0090g00010.t01	AT2G18960.1	12182706
AT2G18960.1	VIT_19s0014g02640.t01	AT4G27500.1	12182706
AT2G18960.1	VIT_19s0014g02640.t01	AT4G27500.1	16279950

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0090g00010.t01	Wine grape	mitochondrion	27.23	91.43
KRH16408	Soybean	cytosol, extracellular, plasma membrane	37.02	46.28
VIT_01s0011g01030.t01	Wine grape	peroxisome, plasma membrane, plastid	74.47	30.92
Solyc02g011700.1.1	Tomato	extracellular	12.77	27.03
VIT_09s0002g02260.t01	Wine grape	cytosol, peroxisome, plasma membrane	64.68	15.87
VIT_11s0149g00210.t01	Wine grape	extracellular	58.3	14.39
VIT_00s2844g00010.t01	Wine grape	cytosol	9.79	14.38
Bra024101.1-P	Field mustard	plasma membrane	55.32	14.36
PGSC0003DMT400010497	Potato	cytosol, peroxisome, plasma membrane	57.45	14.18
Bra010299.1-P	Field mustard	plasma membrane	56.6	14.16
TraesCS2D01G503000.1	Wheat	golgi, plastid, unclear	57.02	14.09
TraesCS2B01G530500.1	Wheat	peroxisome	57.02	14.09
TraesCS2A01G502400.1	Wheat	golgi	57.02	14.09
Bra010298.1-P	Field mustard	cytosol, peroxisome, plasma membrane	56.6	14.04
VIT_14s0066g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	57.02	14.03
VIT_17s0000g05540.t01	Wine grape	extracellular	57.02	14.02
VIT_11s0052g00620.t01	Wine grape	extracellular	56.6	13.94
VIT_04s0008g02460.t01	Wine grape	cytosol, peroxisome, plasma membrane	56.6	13.94
AT2G18960.1	Thale cress	peroxisome	56.17	13.91
AT5G57350.1	Thale cress	peroxisome	56.17	13.91
Bra024100.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.74	13.82
Bra038835.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.74	13.8
VIT_15s0021g01660.t01	Wine grape	cytosol, peroxisome, plasma membrane	56.17	13.78
Bra002733.1-P	Field mustard	cytosol, peroxisome, plasma membrane	55.74	13.76
Bra020447.1-P	Field mustard	plasma membrane	40.0	13.68
Os04t0656100-01	Rice	plasma membrane	55.32	13.67
EES11577	Sorghum	cytosol, peroxisome, plasma membrane	55.32	13.67
Bra011172.1-P	Field mustard	peroxisome	54.89	13.61
AT4G30190.2	Thale cress	peroxisome	56.6	13.56
HORVU2Hr1G111640.2	Barley	plasma membrane	57.02	13.27
VIT_09s0002g00130.t01	Wine grape	plasma membrane	53.19	13.13
VIT_02s0025g03330.t01	Wine grape	peroxisome	48.09	13.02
Bra024452.1-P	Field mustard	cytosol, peroxisome, plasma membrane	51.91	12.86
AT4G11730.1	Thale cress	peroxisome	44.26	12.79
VIT_00s0477g00070.t01	Wine grape	plastid	16.17	6.79
VIT_02s0025g03360.t01	Wine grape	peroxisome	1.7	2.63
VIT_00s2642g00010.t01	Wine grape	cytosol, peroxisome	1.7	1.63
VIT_02s0488g00010.t01	Wine grape	cytosol	1.28	1.61
VIT_15s0048g00140.t01	Wine grape	cytosol	0.85	0.62
VIT_07s0191g00260.t01	Wine grape	cytosol, plasma membrane	0.43	0.27
VIT_00s0760g00010.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
VIT_15s0048g00170.t01	Wine grape	cytosol, mitochondrion	0.0	0.0
CDY28277	Canola	cytosol	0.0	0.0
CDY13569	Canola	cytosol	0.0	0.0
Zm00001d027603_P001	Maize	plasma membrane	0.0	0.0

Protein Annotations

ArrayExpress:VIT_02s0012g00950	EMBL:FN596247	EnsemblPlants:VIT_02s0012g00950.t01	EnsemblPlantsGene:VIT_02s0012g00950	Gene3D:1.20.1110.10	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	PANTHER:PTHR42861	PANTHER:PTHR42861:SF40
ProteinID:CCB57923	ProteinID:CCB57923.1	ScanProsite:PS00154	SUPFAM:SSF81665	TMHMM:TMhelix	UniParc:UPI0002108064
UniProt:F6HTB3	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2:+:6879277..6879984

Molecular Weight (calculated)

26163.9 Da

IEP (calculated)

9.345

GRAVY (calculated)

0.039

Length

235 amino acids

Sequence
(BLAST)

001: MFITFIHQYL SYLFSLSKPS HACHYSVNTH KPTAYGRYSP HYLLSLIHSA IKCTPSLVKA AHLVDNTNHQ GHFQKVLTAI GNFCIYSIAF GIVVEMVMMY
101: PIQRRKYRDG INNLSVFLIG RIPIATPAVL SVTMAIGPPR LSKQGASTKR MTAIEEMAGM DFLCSDKTGT LTFNKLTVGK SMMEIFSKDV DSDVVILLAA
201: RASWVENQDT IDACSVGRLA DPGENKIRDS WRTHS

Best Arabidopsis Sequence Match ( AT1G80660.1 )
(BLAST)

001: MAGNKDSSWD DIKNEGIDLE KIPIEEVLTQ LRCTREGLTS DEGQTRLEIF GPNKLEEKKE NKVLKFLGFM WNPLSWVMEL AAIMAIALAN GGGRPPDWQD
101: FVGITVLLII NSTISFIEEN NAGNAAAALM AGLAPKTKVL RDGKWSEQEA AILVPGDIIS IKLGDIVPAD GRLLDGDPLK IDQSALTGES LPVTKHPGQE
201: VYSGSTCKQG ELEAVVIATG VHTFFGKAAH LVDSTNQEGH FQKVLTAIGN FCICSIAIGM LIEIVVMYPI QKRAYRDGID NLLVLLIGGI PIAMPTVLSV
301: TMAIGSHRLS QQGAITKRMT AIEEMAGMDV LCSDKTGTLT LNKLTVDKSM VEVFVKDLDK DQLLVNAARA SRVENQDAID ACIVGMLGDP REAREGITEV
401: HFFPFNPVDK RTAITYIDAN GNWHRVSKGA PEQIIELCNL REDASKRAHD IIDKFADRGL RSLAVGRQTV SEKDKNSPGE PWQFLGLLPL FDPPRHDSAE
501: TIRRALDLGV NVKMITGDQL AIGKETGRRL GMGTNMYPSS ALLGQDKDES IASLPVDELI EKADGFAGVF PEHKYEIVKR LQEMKHICGM TGDGVNDAPA
601: LKRADIGIAV ADATDAARSA SDIVLTEPGL SVIVSAVLTS RAIFQRMKNY TIYAVSITIR IVMGFMLLAL IWKFDFSPFM VLIVAILNDG TIMTISKDRV
701: KPSPLPDSWK LKEIFATGVV LGTYLAVMTV VFFWAAESTD FFSAKFGVRS ISGNPHELTA AVYLQVSIVS QALIFVTRSR SWSYVERPGF WLISAFFMAQ
801: LIATLIAVYA NWNFARIRGI GWGWAGVIWL YSIVFYIPLD ILKFIIRYSL SGRAWDNVIE NKTAFTSKKD YGKGEREAQW AQAQRTLHGL QPAQTSDMFN
901: DKSTYRELSE IADQAKRRAE VARLRERHTL KGHVESVVKQ KGLDIEAIQQ HYTL

Arabidopsis Description

AHA9ATPase 9, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q42556]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.