Factsheet for VIT_04s0008g02460.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g00620.t01	Wine grape	extracellular	92.03	92.03
KRH16128	Soybean	endoplasmic reticulum, mitochondrion, nucleus	91.19	91.48
KRH04967	Soybean	plasma membrane	90.99	91.27
KRH52590	Soybean	cytosol, peroxisome, plasma membrane	90.99	91.27
KRH61927	Soybean	endoplasmic reticulum, mitochondrion	90.88	91.17
VIT_11s0149g00210.t01	Wine grape	extracellular	86.9	87.08
VIT_09s0002g02260.t01	Wine grape	cytosol, peroxisome, plasma membrane	83.96	83.61
Bra007845.1-P	Field mustard	cytosol, peroxisome, plasma membrane	83.44	83.26
CDY34767	Canola	peroxisome	83.44	83.26
AT2G24520.2	Thale cress	plasma membrane	85.85	82.39
VIT_17s0000g05540.t01	Wine grape	extracellular	82.18	82.01
VIT_19s0090g00010.t01	Wine grape	mitochondrion	5.97	81.43
VIT_14s0066g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	81.45	81.36
CDX76810	Canola	plasma membrane	72.43	80.91
VIT_09s0002g00130.t01	Wine grape	plasma membrane	78.09	78.26
VIT_00s2844g00010.t01	Wine grape	cytosol	12.89	76.88
VIT_15s0021g01660.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.42	76.1
VIT_00s2642g00010.t01	Wine grape	cytosol, peroxisome	19.18	74.39
VIT_15s0048g00170.t01	Wine grape	cytosol, mitochondrion	8.07	70.0
VIT_02s0025g03330.t01	Wine grape	peroxisome	62.47	68.66
Zm00001d014347_P002	Maize	cytosol	13.73	66.5
CDY08915	Canola	plasma membrane	19.08	64.31
VIT_02s0488g00010.t01	Wine grape	cytosol	12.16	62.37
VIT_00s0760g00010.t01	Wine grape	endoplasmic reticulum, plasma membrane	10.17	57.74
VIT_02s0012g00950.t01	Wine grape	plastid	13.94	56.6
VIT_15s0048g00140.t01	Wine grape	cytosol	18.97	56.39
VIT_02s0025g03360.t01	Wine grape	peroxisome	8.18	51.32
VIT_01s0011g01030.t01	Wine grape	peroxisome, plasma membrane, plastid	23.27	39.22
VIT_07s0191g00260.t01	Wine grape	cytosol, plasma membrane	9.33	23.86
VIT_00s0477g00070.t01	Wine grape	plastid	12.26	20.89

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	EntrezGene:100254244	wikigene:100254244	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
ProteinID:CCB46645	ProteinID:CCB46645.1	ncoils:Coil	UniProt:F6H3A8	EMBL:FN595231	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0006811
GO:GO:0008150	GO:GO:0008152	GO:GO:0008553	GO:GO:0009058	GO:GO:0009987	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0046872	GO:GO:0120029
GO:GO:1902600	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100254244
wikigene:LOC100254244	InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF41	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGR:TC52920	TIGR:TC52997	TIGR:TC63415
TIGR:TC68121	TIGR:TC69716	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix	UniParc:UPI00015C9141
ArrayExpress:VIT_04s0008g02460	EnsemblPlantsGene:VIT_04s0008g02460	EnsemblPlants:VIT_04s0008g02460.t01	unigene:Vvi.7290	unigene:Vvi.8054	RefSeq:XP_002282619
RefSeq:XP_002282619.1	RefSeq:XP_003631816	RefSeq:XP_003631816.1	SEG:seg	:	:

Description

Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:F6H3A8]

Coordinates

chr4:-:2012109..2019788

Molecular Weight (calculated)

104817.0 Da

IEP (calculated)

6.872

GRAVY (calculated)

0.063

Length

954 amino acids

Sequence
(BLAST)

001: MAADKSIGLE EIKNESVDLE RIPIEEVFEQ LKCSREGLTS DEGASRLQIF GPNKLEEKKE SKVLKFLGFM WNPLSWVMEA AAIMAIALAN GGGQPPDWQD
101: FVGIIVLLLI NSTISFIEEN NAGNAAAALM AGLAPKTKVL RDGRWTEQDA AILVPGDIIS IKLGDIVPAD ARLLEGDPLK IDQSALTGES LPVTKNPSDE
201: VFSGSTCKQG EIDAVVIATG VHTFFGKAAH LVDSTNQVGH FQKVLTAIGN FCICSIAVGM IIEIIVMYPI QHRKYRDGID NLLVLLIGGI PIAMPTVLSV
301: TMAIGSHRLS QQGAITKRMT AIEEMAGMDV LCSDKTGTLT LNKLTVDRNL IEVFTKGVEK EHVILLAARA SRIENQDAID AAIVGMLADP KEARAGIREV
401: HFLPFNPVDK RTALTYIDAD GTWHRASKGA PEQILNLCNC KEDVRKKVHG VIDKFAERGL RSLAVARQEV PEKTKDAPGA PWQFVGLLSL FDPPRHDSAE
501: TIRRALNLGV NVKMITGDQL AIAKETGRRL GMGTNMYPSS SLLGQDKDAS IAALPVDELI EKADGFAGVF PEHKYEIVKK LQERKHICGM TGDGVNDAPA
601: LKKADIGIAV ADATDAARGA SDIVLTEPGL SVIISAVLTS RAIFQRMKNY TIYAVSITIR IVFGFLFIAL IWKFDFAPFM VLIIAILNDG TIMTISKDRV
701: KPSPQPDSWK LKEIFATGIV LGGYLALMTV VFFWVMKDTD FFPEKFGVKS IRYSEHEMMA ALYLQVSIVS QALIFVTRSR SWSYVERPGL LLVGAFIAAQ
801: LVATVISVYA NWGFARIKGT GWGWAGVIWL YSVVTYVPLD FLKFAIRYIQ SGKAWDNLLE NKTAFTTKKD YGKEEREAQW AAAQRTLHGL QPPETSNIFS
901: DKSGYRELSE IAEQAKRRAE VARLRELNTL KGHMESVVKL KGLDIDTIQH HYTV

Best Arabidopsis Sequence Match ( AT2G24520.2 )
(BLAST)

001: MEMEKEVVIF LHFHLLFTTI LNLFSFSSSS LSFFPASLWR LPPGKGSELD HIKNESVDLV RIPMEEVFEE LKCTKQGLTA NEASHRLDVF GPNKLEEKKE
101: SKLLKFLGFM WNPLSWVMEV AALMAIALAN GGGRPPDWQD FVGIVCLLLI NSTISFIEEN NAGNAAAALM AGLAPKTKVL RDNQWSEQEA SILVPGDVIS
201: IKLGDIIPAD ARLLDGDPLK IDQSSLTGES IPVTKNPSDE VFSGSICKQG EIEAIVIATG VHTFFGKAAH LVDNTNQIGH FQKVLTSIGN FCICSIALGI
301: IVELLVMYPI QRRRYRDGID NLLVLLIGGI PIAMPSVLSV TMATGSHRLF QQGAITKRMT AIEEMAGMDV LCCDKTGTLT LNKLTVDKNL VEVFAKGVGK
401: EHVFLLAARA SRIENQDAID AAIVGMLADP KEARAGVREV HFFPFNPVDK RTALTYVDSD GNWHRASKGA PEQILNLCNC KEDVRRKVHG VIDKFAERGL
501: RSLAVARQEV LEKKKDAPGG PWQLVGLLPL FDPPRHDSAE TIRRALNLGV NVKMITGDQL AIGKETGRRL GMGTNMYPSS ALLGQVKDSS LGALPVDELI
601: EKADGFAGVF PEHKYEIVHR LQQRNHICGM TGDGVNDAPA LKKADIGIAV VDATDAARGA SDIVLTEPGL SVIISAVLTS RAIFQRMKNY TIYAVSITIR
701: IVFGFMFIAL IWQFDFSPFM VLIIAILNDG TIMTISKDRM KPSPQPDSWK LRDIFSTGVV LGGYQALMTV VFFWVMKDSD FFSNYFGVRP LSQRPEQMMA
801: ALYLQVSIIS QALIFVTRSR SWSYAECPGL LLLGAFVIAQ LVATFIAVYA NWSFARIEGA GWGWAGVIWL YSFLTYIPLD LLKFGIRYVL SGKAWLNLLE
901: NKTAFTTKKD YGKEEREAQW AAAQRTLHGL QPAEKNNIFN EKNSYSELSQ IAEQAKRRAE VVRLREINTL KGHVESVVKL KGLDIDTIQQ HYTV

Arabidopsis Description

AHA5H(+)-ATPase 5 [Source:TAIR;Acc:AT2G24520]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.