CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 1
peroxisome 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	peroxisome
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34767	Canola	peroxisome	95.32	85.15
CDY03545	Canola	plastid	61.71	79.85
CDY08915	Canola	plasma membrane	25.64	77.39
CDY30730	Canola	plasma membrane	69.79	75.73
AT2G24520.2	Thale cress	plasma membrane	86.77	74.55
KRH16128	Soybean	endoplasmic reticulum, mitochondrion, nucleus	82.55	74.13
KRH04967	Soybean	plasma membrane	82.55	74.13
CDX91747	Canola	plasma membrane	18.27	73.58
KRH52590	Soybean	cytosol, peroxisome, plasma membrane	81.15	72.87
KRH61927	Soybean	endoplasmic reticulum, mitochondrion	81.03	72.77
VIT_04s0008g02460.t01	Wine grape	cytosol, peroxisome, plasma membrane	80.91	72.43
CDY14186	Canola	plasma membrane	77.17	70.18
CDX82608	Canola	peroxisome	77.28	69.55
CDY30294	Canola	peroxisome	76.93	69.23
CDY64741	Canola	peroxisome	76.93	69.23
CDY51651	Canola	plasma membrane	72.25	68.63
CDY39956	Canola	plasma membrane	69.09	68.53
CDX87330	Canola	plasma membrane	68.74	68.18
CDY28167	Canola	peroxisome	75.53	68.04
CDX72218	Canola	peroxisome	72.37	67.84
CDY45757	Canola	peroxisome	76.11	67.57
CDY67153	Canola	peroxisome	72.6	67.54
CDY45897	Canola	extracellular	7.26	67.39
CDY51650	Canola	plasma membrane	71.78	67.36
CDY42259	Canola	peroxisome	74.94	67.3
CDY47940	Canola	peroxisome	74.94	67.3
CDX72217	Canola	peroxisome	71.55	67.14
CDX93092	Canola	peroxisome	74.59	67.12
CDY50939	Canola	peroxisome	74.59	67.12
CDY25913	Canola	peroxisome	74.82	67.12
CDY38294	Canola	peroxisome	74.71	67.02
CDX79363	Canola	plasma membrane	67.45	66.67
CDX67957	Canola	peroxisome	68.62	65.47
CDY56511	Canola	peroxisome	67.92	64.66
CDY34800	Canola	endoplasmic reticulum, plasma membrane, plastid	7.49	64.65
CDY62140	Canola	peroxisome	50.59	62.97
Zm00001d014347_P002	Maize	cytosol	14.17	61.42
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	16.28	61.23
CDY14177	Canola	extracellular	17.8	60.32
CDY69631	Canola	cytosol, peroxisome, plasma membrane	36.77	59.92
CDY41176	Canola	peroxisome	66.98	59.52
CDX71820	Canola	peroxisome	66.86	59.42
CDY56993	Canola	peroxisome	65.46	59.03
CDX96779	Canola	plasma membrane	65.22	59.0
CDX83917	Canola	plasma membrane	65.11	58.9
CDY09517	Canola	cytosol, endoplasmic reticulum, plasma membrane	13.58	58.88
CDY42692	Canola	peroxisome	64.4	58.64
CDY67606	Canola	peroxisome	34.78	58.58
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	14.4	55.41
CDY39222	Canola	plasma membrane	14.64	53.88
CDY35173	Canola	cytosol	18.5	49.22
CDX76840	Canola	plasma membrane	7.26	45.26
CDX98252	Canola	nucleus	3.63	39.24
CDY28277	Canola	cytosol	4.92	38.89
CDY24136	Canola	mitochondrion	8.9	32.2
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	8.08	30.94
CDY45679	Canola	cytosol, golgi, plastid	8.08	30.67
CDY33128	Canola	plastid	7.49	28.96
CDY13569	Canola	cytosol	2.58	25.58
CDY31231	Canola	plastid	5.85	25.25
CDY26756	Canola	mitochondrion	6.44	23.71
CDY50206	Canola	endoplasmic reticulum	3.63	14.76
CDX76809	Canola	cytosol, nucleus, peroxisome	2.11	11.76

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	Gene3D:2.60.120.1500	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	GO:A0A078CIU2
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDX76810	ProteinID:CDX76810
ProteinID:CDX76810.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0008553	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0120029	EnsemblPlantsGene:GSBRNA2T00127311001	InterPro:HAD-like_sf	InterPro:IPR023299
InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154
PANTHER:PTHR42861	PANTHER:PTHR42861:SF41	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix	UniParc:UPI0004EEBD70	SEG:seg	:

Description

BnaC08g33960D

Coordinates

chrLK031808:+:1223888..1227808

Molecular Weight (calculated)

94194.5 Da

IEP (calculated)

7.164

GRAVY (calculated)

0.098

Length

854 amino acids

Sequence
(BLAST)

001: MHNSFKTIMI VIYYTHKISK PNNKLFIYNN VFLIYTLKVL RDRQWSEQQA SILVPGDIIT VKLGDIIPAD ARLLDGDPLK IDQSSLTGES IPVTKTPGDE
101: IFSGSTCKQG EIEAIVVATG VHTFFGKAAH LVDTANQTGH FQRVVTSIGN FCICSIALGI AVELLVMYPI QRREYRDGID NLLVLLIGGV PIAMPSVLSV
201: TMAIGSHRLS LQGAVTKRMT AIEEMAGMDV LLSDKTGTLT LNKLTVDKNL VELFAKGVDR ENVILLAARA SRIENQDAID AAIVGMLADP KEARAGVREV
301: HFLPFNPVDK RTALTYVESD GSWYRASKGA TEQILNLCSC KEDVKRKAHG VIDKFAERGL RSLAVARQEV PEKKKDASGG PWELVGLLPL FDPPRHDSAE
401: TIRRALNLGV NVKMITGDQL AIGKETGRRL GMGTNMYPSS ALLGQEKDSS LGALPVDELI EKADGFTEVF PEHKYEIVSR LQQRNHICGM TGDGVNDTSA
501: LKKSDIGIAV AGATDAARGA SDIVLTEPGL SVIISAVLTS RAIFQRMKNY TIYAVSNTIR IVFGFMFIAL LWEFDFAPFM VLIIAILNDG AIMTISKDNV
601: KPSPQPDSWK LIEIFSTGVV FGGYQALMTV VFFWAMIDTD IFSNMFGVRP LSQRPEQMMA ALYLQVSITS QALIFVTRSR SWSYVEPPGL LLLGAFVIAQ
701: LVATLIAVYA NWNFARIEGA GWGWAGVIWL YSLVTYIPLD LLKFLIRYVL SGKAWLNLLE NKTAFTTKKD YGKEEREAQW AAAQRTLHGL QPRETNIIFN
801: EKNCYSELSE IAEQAKRRAE VARLRELSTL TGQVESVVKL GGLDIDAIQQ HYTV

Best Arabidopsis Sequence Match ( AT2G18960.1 )
(BLAST)

001: MSGLEDIKNE TVDLEKIPIE EVFQQLKCTR EGLTTQEGED RIVIFGPNKL EEKKESKILK FLGFMWNPLS WVMEAAALMA IALANGDNRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TSIGNFCICS IAIGIAIEIV VMYPIQHRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDSDGNWHR VSKGAPEQIL DLANARPDLR KKVLSCIDKY AERGLRSLAV ARQVVPEKTK ESPGGPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSAALLGT DKDSNIASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGIVLGGYQ AIMSVIFFWA AHKTDFFSDK FGVRSIRDNN DELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FVIAQLVATL
801: IAVYADWTFA KVKGIGWGWA GVIWIYSIVT YFPQDILKFA IRYILSGKAW ASLFDNRTAF TTKKDYGIGE REAQWAQAQR TLHGLQPKED VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVAKLKGLDI DTAGHHYTV

Arabidopsis Description

AHA1Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VSN5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.