CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
plastid 3
peroxisome 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX91747	Canola	plasma membrane	27.27	84.91
CDY45897	Canola	extracellular	11.06	79.35
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	25.91	75.33
CDY09517	Canola	cytosol, endoplasmic reticulum, plasma membrane	21.97	73.6
CDY14177	Canola	extracellular	27.12	71.03
CDY34800	Canola	endoplasmic reticulum, plasma membrane, plastid	10.45	69.7
CDY14186	Canola	plasma membrane	98.64	69.33
CDY30730	Canola	plasma membrane	81.21	68.11
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	22.42	66.67
CDY28167	Canola	peroxisome	94.55	65.82
AT4G30190.2	Thale cress	peroxisome	97.27	65.44
CDY67153	Canola	peroxisome	90.0	64.71
CDY39222	Canola	plasma membrane	22.73	64.66
CDX82608	Canola	peroxisome	92.88	64.59
CDY30294	Canola	peroxisome	92.58	64.38
CDY64741	Canola	peroxisome	92.42	64.28
CDY51651	Canola	plasma membrane	85.91	63.07
CDX72218	Canola	peroxisome	86.21	62.46
CDY51650	Canola	plasma membrane	85.61	62.09
CDX72217	Canola	peroxisome	85.45	61.98
CDY08915	Canola	plasma membrane	26.52	61.84
CDX76810	Canola	plasma membrane	79.85	61.71
PGSC0003DMT400010497	Potato	cytosol, peroxisome, plasma membrane	88.03	61.03
CDY35173	Canola	cytosol	29.39	60.44
EES11577	Sorghum	cytosol, peroxisome, plasma membrane	86.21	59.83
Os04t0656100-01	Rice	plasma membrane	85.3	59.2
CDY47940	Canola	peroxisome	85.15	59.1
CDY42259	Canola	peroxisome	85.15	59.1
CDY25913	Canola	peroxisome	85.15	59.03
CDY38294	Canola	peroxisome	84.7	58.72
TraesCS2D01G503000.1	Wheat	golgi, plastid, unclear	84.09	58.36
TraesCS2B01G530500.1	Wheat	peroxisome	84.09	58.36
CDY56511	Canola	peroxisome	78.94	58.08
TraesCS2A01G502400.1	Wheat	golgi	83.64	58.04
CDX76840	Canola	plasma membrane	11.82	56.93
CDY39956	Canola	plasma membrane	73.64	56.45
CDX87330	Canola	plasma membrane	73.33	56.21
CDY45757	Canola	peroxisome	81.52	55.93
CDX93092	Canola	peroxisome	80.15	55.74
CDY50939	Canola	peroxisome	80.0	55.64
CDY34767	Canola	peroxisome	80.0	55.23
CDX79363	Canola	plasma membrane	71.97	54.98
HORVU2Hr1G111640.2	Barley	plasma membrane	83.64	54.65
CDX67957	Canola	peroxisome	73.03	53.85
CDY62140	Canola	peroxisome	52.42	50.44
CDY41176	Canola	peroxisome	71.21	48.91
CDX71820	Canola	peroxisome	71.21	48.91
CDX96779	Canola	plasma membrane	69.55	48.62
CDX83917	Canola	plasma membrane	69.39	48.52
CDY28277	Canola	cytosol	7.88	48.15
CDY56993	Canola	peroxisome	68.79	47.94
CDY42692	Canola	peroxisome	67.42	47.44
CDY69631	Canola	cytosol, peroxisome, plasma membrane	28.33	35.69
CDY13569	Canola	cytosol	4.39	33.72
CDY67606	Canola	peroxisome	25.76	33.53
CDY45679	Canola	cytosol, golgi, plastid	11.21	32.89
CDX98252	Canola	nucleus	3.79	31.65
CDY24136	Canola	mitochondrion	10.45	29.24
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	9.39	27.8
CDY33128	Canola	plastid	8.94	26.7
CDY31231	Canola	plastid	7.12	23.74
CDY26756	Canola	mitochondrion	7.12	20.26
CDY50206	Canola	endoplasmic reticulum	3.64	11.43
CDX76809	Canola	cytosol, nucleus, peroxisome	0.0	0.0

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	GO:A0A078ENP4	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cyto_dom_N	EnsemblPlants:CDY03545	ProteinID:CDY03545	ProteinID:CDY03545.1	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0008553	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0120029	EnsemblPlantsGene:GSBRNA2T00116256001	InterPro:HAD-like_sf	InterPro:IPR023299	InterPro:P-type_ATPase_IIIA	PFAM:PF00702
PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF19	InterPro:P_typ_ATPase
SUPFAM:SSF56784	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix	UniParc:UPI0004EB03B7
SEG:seg	:	:	:	:	:

Description

BnaC03g68040D

Coordinates

chrLK031944:+:154664..157280

Molecular Weight (calculated)

72949.1 Da

IEP (calculated)

9.595

GRAVY (calculated)

0.075

Length

660 amino acids

Sequence
(BLAST)

001: MPTVLSVTMA IGSHRLSQQG AITKRMTAIE EMAGMDVLCS DKTGTLTLNK LSVDKNLVEV FCKGVEKDQV LLFAAMASRI ENQDAIDAAM VGMLADPKEA
101: RAGIREVHFL PFNPVDKRTA LTYIDSSGSW HRVSKGAPEQ ILELAKANSD LSKKVLSIID KYAERGLRSL AVARQVVPEK TKESPGGPWE FVGLLPLFDP
201: PRHDSAETIR RALNLGVNVK MITGDQLAIG KETGRRLGMG TNMYPSSALL GTHKDANLAS IPVEELIEKA DGFAGVFPEH KYEIVKKLQE LKHIVGMTGD
301: GVNDAPALKK ADIGIAVADA TDAARGASDI VLTEPGLSVI ISAVLTSRAI FQRMKNYTIY AVSITIRIVF GFMLIALIWK FDFSAFMVLI IAILNDGTIM
401: TISKDRVKPS PTPDSWKLKE IFATGVVLGG YQAMMTVIFF LAAHKTDFFS DTFGVRSIRN NNNELMGAVY LQVSIISQAL IFVTRSRSWS FVERPGALLM
501: VAFLIAQLVA TLIAVYANWE FAKVRGIGWG WAGVIWLYSI VTYFPQDIFK FAIRYILSGK AWLNLFENKT AFTMKKDYGK EEREAQWALA QRTLHGLQPK
601: EAVNIFPEKG SYRELSEIAE QAKRRAEIAR LRELHTLKGH VESVVKLKGL DIETPGHYTV

Best Arabidopsis Sequence Match ( AT2G18960.1 )
(BLAST)

001: MSGLEDIKNE TVDLEKIPIE EVFQQLKCTR EGLTTQEGED RIVIFGPNKL EEKKESKILK FLGFMWNPLS WVMEAAALMA IALANGDNRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TSIGNFCICS IAIGIAIEIV VMYPIQHRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDSDGNWHR VSKGAPEQIL DLANARPDLR KKVLSCIDKY AERGLRSLAV ARQVVPEKTK ESPGGPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSAALLGT DKDSNIASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGIVLGGYQ AIMSVIFFWA AHKTDFFSDK FGVRSIRDNN DELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FVIAQLVATL
801: IAVYADWTFA KVKGIGWGWA GVIWIYSIVT YFPQDILKFA IRYILSGKAW ASLFDNRTAF TTKKDYGIGE REAQWAQAQR TLHGLQPKED VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVAKLKGLDI DTAGHHYTV

Arabidopsis Description

AHA1Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VSN5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.