CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, golgi, plastid

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 1
extracellular 1
golgi 2
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plastid
Any Predictor:	cytosol, golgi, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31231	Canola	plastid	37.33	42.42
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.78	26.01
CDY24136	Canola	mitochondrion	24.89	23.73
CDY26756	Canola	mitochondrion	18.22	17.67
CDY33128	Canola	plastid	15.56	15.84
CDY50206	Canola	endoplasmic reticulum	14.67	15.71
CDY62140	Canola	peroxisome	36.89	12.1
CDY03545	Canola	plastid	32.89	11.21
CDY69631	Canola	cytosol, peroxisome, plasma membrane	24.0	10.31
CDY67606	Canola	peroxisome	22.22	9.86
CDY42259	Canola	peroxisome	40.0	9.46
CDY47940	Canola	peroxisome	40.0	9.46
CDY56511	Canola	peroxisome	36.89	9.25
CDY38294	Canola	peroxisome	39.11	9.24
CDY25913	Canola	peroxisome	39.11	9.24
CDX91747	Canola	plasma membrane	8.44	8.96
CDY30730	Canola	plasma membrane	31.11	8.89
CDY51651	Canola	plasma membrane	35.11	8.79
CDX72218	Canola	peroxisome	35.56	8.78
CDX82608	Canola	peroxisome	36.89	8.75
CDY67153	Canola	peroxisome	35.56	8.71
CDX72217	Canola	peroxisome	35.11	8.68
CDY51650	Canola	plasma membrane	35.11	8.68
CDY64741	Canola	peroxisome	36.0	8.54
CDY30294	Canola	peroxisome	36.0	8.54
CDY14186	Canola	plasma membrane	35.56	8.52
CDY28167	Canola	peroxisome	35.56	8.44
CDY50939	Canola	peroxisome	34.22	8.11
CDX93092	Canola	peroxisome	34.22	8.11
CDX76810	Canola	plasma membrane	30.67	8.08
CDY45757	Canola	peroxisome	33.33	7.8
CDX79363	Canola	plasma membrane	29.78	7.75
CDY34767	Canola	peroxisome	32.89	7.74
CDY39956	Canola	plasma membrane	29.33	7.67
CDX87330	Canola	plasma membrane	29.33	7.67
CDX96779	Canola	plasma membrane	31.11	7.42
CDX67957	Canola	peroxisome	29.33	7.37
CDX71820	Canola	peroxisome	31.11	7.28
CDY41176	Canola	peroxisome	31.11	7.28
CDY42692	Canola	peroxisome	30.22	7.25
CDX83917	Canola	plasma membrane	30.22	7.2
CDY56993	Canola	peroxisome	30.22	7.18
CDY08915	Canola	plasma membrane	6.22	4.95
CDX76809	Canola	cytosol, nucleus, peroxisome	2.67	3.92
CDX98252	Canola	nucleus	1.33	3.8
OQU78858	Sorghum	cytosol	4.0	3.78
CDY28277	Canola	cytosol	1.33	2.78
CDY14177	Canola	extracellular	3.11	2.78
Zm00001d019796_P001	Maize	plasma membrane	0.0	0.0
VIT_00s0760g00010.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
CDX76840	Canola	plasma membrane	0.0	0.0
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	0.0	0.0
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	0.0	0.0
CDY09517	Canola	cytosol, endoplasmic reticulum, plasma membrane	0.0	0.0
CDY13569	Canola	cytosol	0.0	0.0
CDY34800	Canola	endoplasmic reticulum, plasma membrane, plastid	0.0	0.0
CDY45897	Canola	extracellular	0.0	0.0
CDY35173	Canola	cytosol	0.0	0.0
CDY39222	Canola	plasma membrane	0.0	0.0

Protein Annotations

EnsemblPlants:CDY45679	EnsemblPlantsGene:GSBRNA2T00082463001	PANTHER:PTHR42861	PANTHER:PTHR42861:SF40	ProteinID:CDY45679	ProteinID:CDY45679.1
UniParc:UPI0004EE61AF	UniProt:A0A078I8E8	MapMan:35.1	:	:	:

Description

BnaCnng13440DBnaCnng13440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8E8]

Coordinates

chrLK032633:+:44463..46209

Molecular Weight (calculated)

25373.6 Da

IEP (calculated)

9.059

GRAVY (calculated)

-0.045

Length

225 amino acids

Sequence
(BLAST)

001: MRRMTLKGSK SIIATPHTVF FDEMVARILN QMLIGLQLLF IDEKLVLSSV ARTENQDAID AAIWLEYLLT LKKQELEFER FTTSDSIQST YIDSNGDWHR
101: CNTRADLRNR VQLAVARRLY LRKQKISSGG LCEFIDVLPM FGPPRHDSAY TIRRASDLSV NIQMITDSTY ARYGIKHKVD GFTARANIGI APVTDATYAA
201: RGASDIIYSV SVTIFSYSLS SCSLL

Best Arabidopsis Sequence Match ( AT5G57350.3 )
(BLAST)

001: MYPIQRRHYR DGIDNLLVLL IGGIPIAMPT VLSVTMAIGS HKLSQQGAIT KRMTAIEEMA GMDVLCSDKT GTLTLNKLSV DKNLIEVYCK GVEKDEVLLF
101: AARASRVENQ DAIDAAMVGM LADPKEARAG IREIHFLPFN PVDKRTALTF IDSNGNWHRV SKGAPEQILD LCNARADLRK RVHSTIDKYA ERGLRSLAVS
201: RQTVPEKTKE SSGSPWEFVG VLPLFDPPRH DSAETIRRAL DLGVNVKMIT GDQLAIAKET GRRLGMGSNM YPSSSLLGKH KDEAMAHIPV EDLIEKADGF
301: AGVFPEHKYE IVKKLQERKH ICGMTGDGVN DAPALKKADI GIAVADATDA ARGASDIVLT EPGLSVIISA VLTSRAIFQR MKNYTIYAVS ITIRIVFGFM
401: LIALIWKFDF SPFMVLIIAI LNDGTIMTIS KDRVKPSPTP DSWKLKEIFA TGVVLGGYMA IMTVVFFWAA YKTDFFPRTF HVRDLRGSEH EMMSALYLQV
501: SIVSQALIFV TRSRSWSFTE RPGYFLLIAF WVAQLIATAI AVYGNWEFAR IKGIGWGWAG VIWLYSIVFY FPLDIMKFAI RYILAGTAWK NIIDNRTAFT
601: TKQNYGIEER EAQWAHAQRT LHGLQNTETA NVVPERGGYR ELSEIANQAK RRAEIARLRE LHTLKGHVES VVKLKGLDIE TAGHYTV

Arabidopsis Description

AHA3Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UHY0]
SUBAcon: [cytosol,plasma membrane,golgi,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.