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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plastid 1
  • peroxisome 1
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010299.1-P Field mustard plasma membrane 100.0 100.0
Bra010298.1-P Field mustard cytosol, peroxisome, plasma membrane 99.68 98.84
CDY03545 Canola plastid 69.33 98.64
CDY28167 Canola peroxisome 95.1 94.2
CDY67153 Canola peroxisome 91.91 94.01
CDX82608 Canola peroxisome 94.14 93.15
CDY30294 Canola peroxisome 93.72 92.73
AT4G30190.2 Thale cress peroxisome 96.81 92.66
CDY51651 Canola plasma membrane 88.71 92.66
CDY64741 Canola peroxisome 93.61 92.62
CDX72218 Canola peroxisome 88.82 91.55
CDY51650 Canola plasma membrane 88.71 91.54
CDX72217 Canola peroxisome 88.6 91.43
PGSC0003DMT400010497 Potato cytosol, peroxisome, plasma membrane 88.29 87.08
CDX91747 Canola plasma membrane 19.38 85.85
CDY25913 Canola peroxisome 86.79 85.61
CDY47940 Canola peroxisome 86.69 85.59
CDY42259 Canola peroxisome 86.69 85.59
CDY38294 Canola peroxisome 86.47 85.29
EES11577 Sorghum cytosol, peroxisome, plasma membrane 86.05 84.96
CDY62140 Canola peroxisome 61.98 84.84
CDY56511 Canola peroxisome 80.62 84.39
Os04t0656100-01 Rice plasma membrane 85.3 84.23
TraesCS2D01G503000.1 Wheat golgi, plastid, unclear 84.98 83.91
TraesCS2B01G530500.1 Wheat peroxisome 84.98 83.91
TraesCS2A01G502400.1 Wheat golgi 84.45 83.39
CDY39956 Canola plasma membrane 75.83 82.69
CDY45897 Canola extracellular 8.09 82.61
CDX87330 Canola plasma membrane 75.61 82.46
CDX79363 Canola plasma membrane 74.65 81.13
CDX93092 Canola peroxisome 81.9 81.03
CDY50939 Canola peroxisome 81.79 80.93
CDX67957 Canola peroxisome 77.0 80.78
CDY69631 Canola cytosol, peroxisome, plasma membrane 44.62 79.96
CDY45757 Canola peroxisome 81.9 79.94
CDY30730 Canola plasma membrane 66.67 79.54
CDY67606 Canola peroxisome 42.81 79.29
HORVU2Hr1G111640.2 Barley plasma membrane 84.56 78.61
CDY34767 Canola peroxisome 79.34 77.93
CDX76810 Canola plasma membrane 70.18 77.17
CDY62141 Canola cytosol, endoplasmic reticulum, plasma membrane 18.42 76.21
CDY09517 Canola cytosol, endoplasmic reticulum, plasma membrane 15.65 74.62
CDY14177 Canola extracellular 19.81 73.81
CDY41176 Canola peroxisome 74.01 72.32
CDX71820 Canola peroxisome 73.8 72.11
CDY56993 Canola peroxisome 71.67 71.07
CDY42692 Canola peroxisome 70.82 70.9
CDX96779 Canola plasma membrane 70.93 70.55
CDX83917 Canola plasma membrane 70.82 70.44
CDY34800 Canola endoplasmic reticulum, plasma membrane, plastid 7.35 69.7
CDX96220 Canola endoplasmic reticulum, nucleus, plasma membrane 15.87 67.12
CDY39222 Canola plasma membrane 16.08 65.09
CDY08915 Canola plasma membrane 19.06 63.25
CDX76809 Canola cytosol, nucleus, peroxisome 10.22 62.75
CDY35173 Canola cytosol 20.77 60.75
CDX76840 Canola plasma membrane 8.09 55.47
CDY28277 Canola cytosol 5.43 47.22
CDX98252 Canola nucleus 3.3 39.24
CDY24136 Canola mitochondrion 9.16 36.44
CDY45679 Canola cytosol, golgi, plastid 8.52 35.56
CDY09377 Canola endoplasmic reticulum, plasma membrane, vacuole 8.31 34.98
CDY13569 Canola cytosol 3.09 33.72
CDY33128 Canola plastid 6.71 28.51
CDY26756 Canola mitochondrion 6.71 27.16
CDY31231 Canola plastid 5.54 26.26
CDY50206 Canola endoplasmic reticulum 4.37 19.52
Protein Annotations
KEGG:00190+3.6.3.6Gene3D:1.20.1110.10MapMan:24.1.2.3.1Gene3D:3.40.1110.10GO:A0A078FM63UniProt:A0A078FM63
InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfEnsemblPlants:CDY14186
ProteinID:CDY14186ProteinID:CDY14186.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006139GO:GO:0006754GO:GO:0006810GO:GO:0006811GO:GO:0008150GO:GO:0008152
GO:GO:0008553GO:GO:0009058GO:GO:0009987GO:GO:0015992GO:GO:0016020GO:GO:0016021
GO:GO:0016787GO:GO:0016887GO:GO:0046872GO:GO:0120029GO:GO:1902600EnsemblPlantsGene:GSBRNA2T00078745001
InterPro:HAD-like_sfInterPro:IPR023299InterPro:P-type_ATPase_IIIAPFAM:PF00122PFAM:PF00690PFAM:PF00702
PRINTS:PR00119PRINTS:PR00120ScanProsite:PS00154PANTHER:PTHR42861PANTHER:PTHR42861:SF19InterPro:P_typ_ATPase
SMART:SM00831SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01647
TMHMM:TMhelixUniParc:UPI00025470B9SEG:seg:::
Description
BnaA08g13170DPlasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A078FM63]
Coordinates
chrLK032041:+:29712..34061
Molecular Weight (calculated)
103304.0 Da
IEP (calculated)
6.957
GRAVY (calculated)
0.099
Length
939 amino acids
Sequence
(BLAST)
001: MFCADEKIPI EEVFQQLNCT REGLTTQEGE ERIQIFGPNK LEEKKESKIL KFLGFMWNPL SWVMEAAAIM AIALANGDGR PPDWQDFVGI ICLLVINSTI
101: SFIEENNAGN AAAALMAGLA PKTKVLRDGK WSEQEAAILV PGDIVSIKLG DIIPADGRLL EGDPLKVDQS ALTGESLPVT KHPGQEVYSG STCKQGEIEA
201: VVIATGVHTF FGKAAHLVDS TNQVGHFQKV LTAIGNFCIC SIAIGMVIEI IVMYPIQRRK YRDGIDNLLV LLIGGIPIAM PTVLSVTMAI GSHRLSQQGA
301: ITKRMTAIEE MAGMDVLCSD KTGTLTLNKL SVDKNLVEVF CKGVEKDQVL LFAAMASRIE NQDAIDAAMV GMLADPKEAR AGIREVHFLP FNPVDKRTAL
401: TYIDSSGNWH RVSKGAPEQI LELAKANSDL SKKVLSIIEK YAERGLRSLA VARQVVPEKT KESPGGPWEF VGLLPLFDPP RHDSAETIRR ALNLGVNVKM
501: ITGDQLAIGK ETGRRLGMGT NMYPSSAFLG SHKDANLASI PVEELIEKAD GFAGVFPEHK YEIVKKLQEL KHIVGMTGDG VNDAPALKKA DIGIAVADAT
601: DAARGASDIV LTEPGLSVII SAVLTSRAIF QRMKNYTIYA VSITIRIVFG FMLIALIWEF DFSAFMVLII AILNDGTIMT ISKDRVKPSP TPDSWKLKEI
701: FATGVVLGGY QAMMTVVFFW AAHKTDFFSD TFGVRSIRDN NNELMGAVYL QVSIISQALI FVTRSRSWSF VERPGALLMV AFLIAQLVAT LIAVYANWEF
801: AKVRGIGWGW AGVIWLYSIV TYFPQDIFKF AIRYILSGKA WLNLFENKTA FTMKKDYGKE EREAQWALAQ RTLHGLQPKE AVNIFPEKGS YRELSEIAEQ
901: AKRRAEIARL RELHTLKGHV ESVVKLKGLD IETSGHYTV
Best Arabidopsis Sequence Match ( AT4G30190.1 )
(BLAST)
001: MSSLEDIKNE TVDLEKIPIE EVFQQLKCSR EGLTTQEGED RIQIFGPNKL EEKKESKLLK FLGFMWNPLS WVMEMAAIMA IALANGDGRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TAIGNFCICS IAIGMVIEII VMYPIQRRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDGSGNWHR VSKGAPEQIL ELAKASNDLS KKVLSIIDKY AERGLRSLAV ARQVVPEKTK ESPGAPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSSALLGT HKDANLASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGVVLGGYQ AIMTVIFFWA AHKTDFFSDT FGVRSIRDNN HELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FLIAQLIATL
801: IAVYANWEFA KIRGIGWGWA GVIWLYSIVT YFPLDVFKFA IRYILSGKAW LNLFENKTAF TMKKDYGKEE REAQWALAQR TLHGLQPKEA VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVVKLKGLDI ETPSHYTV
Arabidopsis Description
HA2Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:F4JPJ7]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.