Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 3
- extracellular 2
- vacuole 3
- plasma membrane 3
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039509.1-P | Field mustard | cytosol, mitochondrion | 61.88 | 81.18 |
| CDY24136 | Canola | mitochondrion | 74.44 | 70.34 |
| CDY26756 | Canola | mitochondrion | 72.2 | 69.4 |
| CDY50206 | Canola | endoplasmic reticulum | 57.4 | 60.95 |
| CDY31231 | Canola | plastid | 29.6 | 33.33 |
| GSMUA_Achr8P28430_001 | Banana | endoplasmic reticulum, golgi, plasma membrane | 25.56 | 31.84 |
| CDY45679 | Canola | cytosol, golgi, plastid | 26.01 | 25.78 |
| CDY33128 | Canola | plastid | 23.77 | 23.98 |
| CDY69631 | Canola | cytosol, peroxisome, plasma membrane | 31.84 | 13.55 |
| CDY67606 | Canola | peroxisome | 30.49 | 13.41 |
| CDY62140 | Canola | peroxisome | 34.98 | 11.37 |
| CDY03545 | Canola | plastid | 27.8 | 9.39 |
| CDY42259 | Canola | peroxisome | 39.46 | 9.25 |
| CDY47940 | Canola | peroxisome | 39.46 | 9.25 |
| CDY56511 | Canola | peroxisome | 36.77 | 9.14 |
| CDY38294 | Canola | peroxisome | 39.01 | 9.14 |
| CDY25913 | Canola | peroxisome | 38.56 | 9.03 |
| CDY64741 | Canola | peroxisome | 36.77 | 8.64 |
| CDX82608 | Canola | peroxisome | 36.77 | 8.64 |
| CDY30294 | Canola | peroxisome | 36.77 | 8.64 |
| CDY67153 | Canola | peroxisome | 34.98 | 8.5 |
| CDY51650 | Canola | plasma membrane | 34.08 | 8.35 |
| CDY14186 | Canola | plasma membrane | 34.98 | 8.31 |
| CDY34767 | Canola | peroxisome | 35.43 | 8.26 |
| CDX72217 | Canola | peroxisome | 33.63 | 8.24 |
| CDX72218 | Canola | peroxisome | 33.63 | 8.23 |
| CDY51651 | Canola | plasma membrane | 33.18 | 8.23 |
| CDY28167 | Canola | peroxisome | 34.98 | 8.23 |
| CDY50939 | Canola | peroxisome | 34.98 | 8.22 |
| CDX93092 | Canola | peroxisome | 34.98 | 8.22 |
| CDX76810 | Canola | plasma membrane | 30.94 | 8.08 |
| CDY45757 | Canola | peroxisome | 33.18 | 7.69 |
| CDY42692 | Canola | peroxisome | 30.94 | 7.36 |
| CDX96779 | Canola | plasma membrane | 30.94 | 7.31 |
| CDY56993 | Canola | peroxisome | 30.94 | 7.29 |
| CDX71820 | Canola | peroxisome | 31.39 | 7.28 |
| CDY41176 | Canola | peroxisome | 31.39 | 7.28 |
| CDY30730 | Canola | plasma membrane | 25.56 | 7.24 |
| CDX83917 | Canola | plasma membrane | 30.49 | 7.2 |
| CDX76809 | Canola | cytosol, nucleus, peroxisome | 4.93 | 7.19 |
| CDX67957 | Canola | peroxisome | 28.25 | 7.04 |
| CDX79363 | Canola | plasma membrane | 26.01 | 6.71 |
| CDX87330 | Canola | plasma membrane | 25.56 | 6.62 |
| CDY39956 | Canola | plasma membrane | 25.56 | 6.62 |
| CDX98252 | Canola | nucleus | 2.24 | 6.33 |
| CDY45897 | Canola | extracellular | 2.24 | 5.43 |
| CDY08915 | Canola | plasma membrane | 4.04 | 3.18 |
| CDX91747 | Canola | plasma membrane | 2.69 | 2.83 |
| CDY14177 | Canola | extracellular | 3.14 | 2.78 |
| CDX76840 | Canola | plasma membrane | 1.35 | 2.19 |
| CDY28277 | Canola | cytosol | 0.9 | 1.85 |
| CDY35173 | Canola | cytosol | 1.79 | 1.25 |
| CDY13569 | Canola | cytosol | 0.45 | 1.16 |
| CDY09517 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
| CDX96220 | Canola | endoplasmic reticulum, nucleus, plasma membrane | 0.0 | 0.0 |
| CDY62141 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 0.0 | 0.0 |
| CDY34800 | Canola | endoplasmic reticulum, plasma membrane, plastid | 0.0 | 0.0 |
| CDY39222 | Canola | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY09377 | EnsemblPlantsGene:GSBRNA2T00030850001 | Gene3D:2.60.120.620 | GO:A0A078F8E4 | PANTHER:PTHR10869 | PANTHER:PTHR10869:SF42 |
| ProteinID:CDY09377 | ProteinID:CDY09377.1 | SEG:seg | UniParc:UPI0004EEF276 | UniProt:A0A078F8E4 | MapMan:35.1 |
Description
BnaA02g26330DBnaA02g26330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8E4]
Coordinates
chrLK031995:+:351977..353762
Molecular Weight (calculated)
25281.7 Da
IEP (calculated)
10.363
GRAVY (calculated)
-0.201
Length
223 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLYVYVSLL IVSNSGTGFP SIRGLQGQKA RYLRDVSRWA NDKDAELLRL GYAILFILIS WSPRIIVLHN FLSSEECEYL KAIARPRLQV STVVNIKTGK
101: GVKSDVRISS GILDLYNTRA GLRKKDHLAI DKYPLRGLRS LAVARQTVPE KTKKKSSGDP WEFVGGLPLF DPPRHDSAYT IRRASDLCAL CQHHETRLSS
201: VWDQTCIHTI SFSTWIRKPS ERV
101: GVKSDVRISS GILDLYNTRA GLRKKDHLAI DKYPLRGLRS LAVARQTVPE KTKKKSSGDP WEFVGGLPLF DPPRHDSAYT IRRASDLCAL CQHHETRLSS
201: VWDQTCIHTI SFSTWIRKPS ERV
001: MAPAMKIVFG LLTFVTVGMV IGSLLQLAFI NRLEDSYGTG FPSLRGLRGQ NTRYLRDVSR WANDKDAELL RIGNVKPEVV SWSPRIIVLH DFLSPEECEY
101: LKAIARPRLQ VSTVVDVKTG KGVKSDVRTS SGMFLTHVER SYPIIQAIEK RIAVFSQVPA ENGELIQVLR YEPQQFYKPH HDYFADTFNL KRGGQRVATM
201: LMYLTDDVEG GETYFPLAGD GDCTCGGKIM KGISVKPTKG DAVLFWSMGL DGQSDPRSIH GGCEVLSGEK WSATKWMRQK ATS
101: LKAIARPRLQ VSTVVDVKTG KGVKSDVRTS SGMFLTHVER SYPIIQAIEK RIAVFSQVPA ENGELIQVLR YEPQQFYKPH HDYFADTFNL KRGGQRVATM
201: LMYLTDDVEG GETYFPLAGD GDCTCGGKIM KGISVKPTKG DAVLFWSMGL DGQSDPRSIH GGCEVLSGEK WSATKWMRQK ATS
Arabidopsis Description
P4H1Prolyl 4-hydroxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW86]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.