CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
plastid 1
peroxisome 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011172.1-P	Field mustard	peroxisome	100.0	100.0
CDY67153	Canola	peroxisome	96.84	100.0
CDY14186	Canola	plasma membrane	94.2	95.1
CDY03545	Canola	plastid	65.82	94.55
CDX72218	Canola	peroxisome	90.72	94.4
CDY51651	Canola	plasma membrane	89.35	94.22
CDY51650	Canola	plasma membrane	90.4	94.18
CDX72217	Canola	peroxisome	89.98	93.74
CDX82608	Canola	peroxisome	93.46	93.36
CDY30294	Canola	peroxisome	93.25	93.15
CDY64741	Canola	peroxisome	93.14	93.05
AT4G30190.2	Thale cress	peroxisome	95.36	92.15
PGSC0003DMT400010497	Potato	cytosol, peroxisome, plasma membrane	86.39	86.03
CDY62140	Canola	peroxisome	61.81	85.42
CDX91747	Canola	plasma membrane	19.09	85.38
EES11577	Sorghum	cytosol, peroxisome, plasma membrane	85.44	85.17
CDY25913	Canola	peroxisome	85.44	85.08
CDY47940	Canola	peroxisome	85.34	85.07
CDY42259	Canola	peroxisome	85.34	85.07
CDY38294	Canola	peroxisome	85.13	84.77
Os04t0656100-01	Rice	plasma membrane	84.92	84.65
CDY56511	Canola	peroxisome	79.96	84.5
TraesCS2B01G530500.1	Wheat	peroxisome	84.18	83.91
TraesCS2D01G503000.1	Wheat	golgi, plastid, unclear	84.18	83.91
TraesCS2A01G502400.1	Wheat	golgi	83.76	83.49
CDY39956	Canola	plasma membrane	74.47	82.0
CDX93092	Canola	peroxisome	81.86	81.77
CDX87330	Canola	plasma membrane	74.26	81.77
CDY50939	Canola	peroxisome	81.75	81.66
CDY69631	Canola	cytosol, peroxisome, plasma membrane	44.94	81.3
CDY67606	Canola	peroxisome	43.14	80.67
CDX79363	Canola	plasma membrane	73.21	80.32
CDY45757	Canola	peroxisome	81.43	80.25
CDX67957	Canola	peroxisome	75.53	80.0
CDY45897	Canola	extracellular	7.7	79.35
CDY30730	Canola	plasma membrane	65.82	79.29
HORVU2Hr1G111640.2	Barley	plasma membrane	83.86	78.71
CDY34767	Canola	peroxisome	78.38	77.72
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	18.35	76.65
CDX76810	Canola	plasma membrane	68.04	75.53
CDY09517	Canola	cytosol, endoplasmic reticulum, plasma membrane	15.61	75.13
CDY14177	Canola	extracellular	19.73	74.21
CDY41176	Canola	peroxisome	73.95	72.94
CDX71820	Canola	peroxisome	73.73	72.74
CDY56993	Canola	peroxisome	71.73	71.81
CDY42692	Canola	peroxisome	70.99	71.75
CDX96779	Canola	plasma membrane	70.57	70.87
CDX83917	Canola	plasma membrane	70.36	70.66
CDX76809	Canola	cytosol, nucleus, peroxisome	11.39	70.59
CDY34800	Canola	endoplasmic reticulum, plasma membrane, plastid	7.28	69.7
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	15.93	68.02
CDY39222	Canola	plasma membrane	16.14	65.95
CDY35173	Canola	cytosol	20.57	60.75
CDY08915	Canola	plasma membrane	18.04	60.42
CDX76840	Canola	plasma membrane	7.7	53.28
CDY28277	Canola	cytosol	5.38	47.22
CDX98252	Canola	nucleus	3.48	41.77
CDY24136	Canola	mitochondrion	9.18	36.86
CDY45679	Canola	cytosol, golgi, plastid	8.44	35.56
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	8.23	34.98
CDY13569	Canola	cytosol	2.85	31.4
CDY33128	Canola	plastid	6.75	28.96
CDY31231	Canola	plastid	5.8	27.78
CDY26756	Canola	mitochondrion	6.75	27.59
CDY50206	Canola	endoplasmic reticulum	4.43	20.0

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	GO:A0A078GSP9	UniProt:A0A078GSP9
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlants:CDY28167
ProteinID:CDY28167	ProteinID:CDY28167.1	ncoils:Coil	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152
GO:GO:0008553	GO:GO:0009058	GO:GO:0009987	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	GO:GO:0016887	GO:GO:0046872	GO:GO:0120029	GO:GO:1902600	EnsemblPlantsGene:GSBRNA2T00039880001
InterPro:HAD-like_sf	InterPro:IPR023299	InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702
PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF19	InterPro:P_typ_ATPase
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647
TMHMM:TMhelix	UniParc:UPI0002546F85	SEG:seg	:	:	:

Description

BnaA01g06820DPlasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A078GSP9]

Coordinates

chrLK032216:-:53124..58017

Molecular Weight (calculated)

104358.0 Da

IEP (calculated)

6.838

GRAVY (calculated)

0.081

Length

948 amino acids

Sequence
(BLAST)

001: MSSLEDIKNE TVDLEKIPIE EVFQQLKCTK EGLTTQEGEE RIQIFGPNKL EEKKESKILK FLGFMWNPLS WVMEAAAIMA IALANGDGRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADCRLLE GDPLKVDQSA LTGESLPVTR HPGQEVFSGS
201: TCKQGEIEAI VIATGVHTFF GKAAHLVDST NQVGHFQKVL TAIGNFCICS IAIGMVIEII VMYPIQRRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHKLAQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRIEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPTDKRTALT YIDSSGNWHR VSKGAPEQIL ELAKANNDLS KRVLNIIDKY AERGLRSLAV ARQVVPEKTK ESPGGPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSSALLGN HKDANLASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVDDATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVLGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGVVLGSYQ AIMSVIFFWL AHKTDFFTDK FGVRSIRDNN NELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FVVAQLVATL
801: IAVYANWEFA KVRGIGWGWA GVIWLYSIVT YFPQDVFKFA IRYILSGKAW LNLFENRIAL TSKKDFGKEE REAQWAVAQR TLHGLQPKEP VSIIPEQGGY
901: RELSEIAEQA KKRAEIARLR ELHTLKGHVE SVVKLKGLDI ETPGHYTV

Best Arabidopsis Sequence Match ( AT4G30190.2 )
(BLAST)

001: MSSLEDIKNE TVDLEKIPIE EVFQQLKCSR EGLTTQEGED RIQIFGPNKL EEKKESKLLK FLGFMWNPLS WVMEMAAIMA IALANGDGRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TAIGNFCICS IAIGMVIEII VMYPIQRRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDGSGNWHR VSKGAPEQIL ELAKASNDLS KKVLSIIDKY AERGLRSLAV ARQVVPEKTK ESPGAPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSSALLGT HKDANLASIP VEELIEKADG FAGVFPGYNL LIYCLDYKPH YMFIAKVVML VLSFVFFIAE
601: HKYEIVKKLQ ERKHIVGMTG DGVNDAPALK KADIGIAVAD ATDAARGASD IVLTEPGLSV IISAVLTSRA IFQRMKNYTI YAVSITIRIV FGFMLIALIW
701: EFDFSAFMVL IIAILNDGTI MTISKDRVKP SPTPDSWKLK EIFATGVVLG GYQAIMTVIF FWAAHKTDFF SDTFGVRSIR DNNHELMGAV YLQVSIISQA
801: LIFVTRSRSW SFVERPGALL MIAFLIAQLI ATLIAVYANW EFAKIRGIGW GWAGVIWLYS IVTYFPLDVF KFAIRYILSG KAWLNLFENK TAFTMKKDYG
901: KEEREAQWAL AQRTLHGLQP KEAVNIFPEK GSYRELSEIA EQAKRRAEIA RLRELHTLKG HVESVVKLKG LDIETPSHYT V

Arabidopsis Description

HA2Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:F4JPJ7]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.