CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum, plastid

Predictor Summary:

plastid 4
endoplasmic reticulum 3
extracellular 2
golgi 2
plasma membrane 3
vacuole 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra039228.1-P	Field mustard	endoplasmic reticulum, plasma membrane	98.99	96.08
CDY09517	Canola	cytosol, endoplasmic reticulum, plasma membrane	54.55	27.41
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	55.56	24.77
CDY39222	Canola	plasma membrane	56.57	24.14
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	53.54	23.35
CDX91747	Canola	plasma membrane	38.38	17.92
CDY35173	Canola	cytosol	53.54	16.51
CDX76840	Canola	plasma membrane	21.21	15.33
KRH16612	Soybean	peroxisome	47.47	14.51
CDY08915	Canola	plasma membrane	35.35	12.37
CDY03545	Canola	plastid	69.7	10.45
TraesCS4A01G247800.1	Wheat	plastid	32.32	9.88
CDY30730	Canola	plasma membrane	59.6	7.5
CDX76810	Canola	plasma membrane	64.65	7.49
CDY14186	Canola	plasma membrane	69.7	7.35
CDY28167	Canola	peroxisome	69.7	7.28
CDY14177	Canola	extracellular	18.18	7.14
CDX87330	Canola	plasma membrane	60.61	6.97
CDY39956	Canola	plasma membrane	60.61	6.97
CDX79363	Canola	plasma membrane	60.61	6.94
CDX82608	Canola	peroxisome	65.66	6.85
CDX67957	Canola	peroxisome	61.62	6.82
CDY50939	Canola	peroxisome	64.65	6.74
CDY64741	Canola	peroxisome	64.65	6.74
CDY30294	Canola	peroxisome	64.65	6.74
CDX93092	Canola	peroxisome	64.65	6.74
CDY34767	Canola	peroxisome	64.65	6.69
CDY42259	Canola	peroxisome	59.6	6.2
CDY47940	Canola	peroxisome	59.6	6.2
CDY45757	Canola	peroxisome	59.6	6.13
CDY25913	Canola	peroxisome	57.58	5.99
CDY38294	Canola	peroxisome	57.58	5.99
CDX71820	Canola	peroxisome	57.58	5.93
CDY41176	Canola	peroxisome	57.58	5.93
CDY42692	Canola	peroxisome	55.56	5.86
CDY56993	Canola	peroxisome	54.55	5.7
CDX98252	Canola	nucleus	4.04	5.06
CDX83917	Canola	plasma membrane	47.47	4.98
CDX96779	Canola	plasma membrane	46.46	4.87
CDX72217	Canola	peroxisome	44.44	4.84
CDY51651	Canola	plasma membrane	43.43	4.78
CDY51650	Canola	plasma membrane	43.43	4.73
CDX72218	Canola	peroxisome	43.43	4.72
CDY67153	Canola	peroxisome	43.43	4.68
CDY56511	Canola	peroxisome	22.22	2.45
CDY13569	Canola	cytosol	1.01	1.16
CDY28277	Canola	cytosol	1.01	0.93
CDY33128	Canola	plastid	1.01	0.45
CDY69631	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0
CDY67606	Canola	peroxisome	0.0	0.0
CDY45679	Canola	cytosol, golgi, plastid	0.0	0.0
VIT_00s2844g00010.t01	Wine grape	cytosol	0.0	0.0
Zm00001d029535_P001	Maize	cytosol, plasma membrane, plastid	0.0	0.0
CDY62140	Canola	peroxisome	0.0	0.0
CDY50206	Canola	endoplasmic reticulum	0.0	0.0
CDY45897	Canola	extracellular	0.0	0.0
CDX76809	Canola	cytosol, nucleus, peroxisome	0.0	0.0
CDY31231	Canola	plastid	0.0	0.0
CDY26756	Canola	mitochondrion	0.0	0.0
CDY24136	Canola	mitochondrion	0.0	0.0
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	0.0	0.0

Protein Annotations

EnsemblPlants:CDY34800	EnsemblPlantsGene:GSBRNA2T00057347001	Gene3D:1.20.1110.10	GO:A0A078H8G5	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR42861	PANTHER:PTHR42861:SF19	ProteinID:CDY34800	ProteinID:CDY34800.1	TMHMM:TMhelix
UniParc:UPI0004EE4E70	UniProt:A0A078H8G5	MapMan:35.1	:	:	:

Description

BnaA09g41670DBnaA09g41670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8G5]

Coordinates

chrLK032341:-:339584..340162

Molecular Weight (calculated)

11207.7 Da

IEP (calculated)

10.568

GRAVY (calculated)

0.175

Length

99 amino acids

Sequence
(BLAST)

1: MSEVYLQVSI ISQALIFVTR SGSWSFVERA GALLMIAFLI AQLFAMVTGK VWLNLVKNKI AFTTKKDFNK EEREAQWAVA QRTLQGLGSC THSRGMWNH

Best Arabidopsis Sequence Match ( AT4G30190.1 )
(BLAST)

001: MSSLEDIKNE TVDLEKIPIE EVFQQLKCSR EGLTTQEGED RIQIFGPNKL EEKKESKLLK FLGFMWNPLS WVMEMAAIMA IALANGDGRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TAIGNFCICS IAIGMVIEII VMYPIQRRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDGSGNWHR VSKGAPEQIL ELAKASNDLS KKVLSIIDKY AERGLRSLAV ARQVVPEKTK ESPGAPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSSALLGT HKDANLASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGVVLGGYQ AIMTVIFFWA AHKTDFFSDT FGVRSIRDNN HELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FLIAQLIATL
801: IAVYANWEFA KIRGIGWGWA GVIWLYSIVT YFPLDVFKFA IRYILSGKAW LNLFENKTAF TMKKDYGKEE REAQWALAQR TLHGLQPKEA VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVVKLKGLDI ETPSHYTV

Arabidopsis Description

HA2Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:F4JPJ7]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.