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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • extracellular 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:extracellular
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13569 Canola cytosol 61.11 76.74
CDY14177 Canola extracellular 31.48 13.49
CDY03545 Canola plastid 48.15 7.88
CDY45897 Canola extracellular 5.56 6.52
CDY30730 Canola plasma membrane 42.59 5.84
CDY39956 Canola plasma membrane 46.3 5.81
CDX87330 Canola plasma membrane 46.3 5.81
CDY42259 Canola peroxisome 50.93 5.78
CDY47940 Canola peroxisome 50.93 5.78
CDY38294 Canola peroxisome 50.93 5.78
CDY25913 Canola peroxisome 50.93 5.78
CDY62140 Canola peroxisome 36.11 5.69
CDX67957 Canola peroxisome 46.3 5.59
PGSC0003DMT400010497 Potato cytosol, peroxisome, plasma membrane 48.15 5.46
CDY51651 Canola plasma membrane 45.37 5.45
CDY67153 Canola peroxisome 46.3 5.45
CDY14186 Canola plasma membrane 47.22 5.43
CDX72217 Canola peroxisome 45.37 5.38
CDY28167 Canola peroxisome 47.22 5.38
CDX72218 Canola peroxisome 45.37 5.38
CDY51650 Canola plasma membrane 44.44 5.27
CDX82608 Canola peroxisome 46.3 5.27
CDY56511 Canola peroxisome 43.52 5.24
CDX79363 Canola plasma membrane 41.67 5.21
CDY64741 Canola peroxisome 45.37 5.16
CDY30294 Canola peroxisome 45.37 5.16
Os04t0656100-01 Rice plasma membrane 44.44 5.05
TraesCS2A01G502400.1 Wheat golgi 43.52 4.94
CDX76810 Canola plasma membrane 38.89 4.92
CDX93092 Canola peroxisome 42.59 4.85
EES11577 Sorghum cytosol, peroxisome, plasma membrane 42.59 4.84
TraesCS2D01G503000.1 Wheat golgi, plastid, unclear 42.59 4.84
TraesCS2B01G530500.1 Wheat peroxisome 42.59 4.84
CDY42692 Canola peroxisome 41.67 4.8
CDY45757 Canola peroxisome 42.59 4.78
CDY56993 Canola peroxisome 41.67 4.75
CDY50939 Canola peroxisome 41.67 4.74
CDX71820 Canola peroxisome 40.74 4.58
CDY41176 Canola peroxisome 40.74 4.58
HORVU2Hr1G111640.2 Barley plasma membrane 42.59 4.55
CDY34767 Canola peroxisome 39.81 4.5
CDX83917 Canola plasma membrane 37.04 4.24
CDX96779 Canola plasma membrane 37.04 4.24
CDX91747 Canola plasma membrane 7.41 3.77
CDY24136 Canola mitochondrion 7.41 3.39
CDY35173 Canola cytosol 8.33 2.8
CDX98252 Canola nucleus 1.85 2.53
CDX76840 Canola plasma membrane 2.78 2.19
CDY09517 Canola cytosol, endoplasmic reticulum, plasma membrane 3.7 2.03
CDX96220 Canola endoplasmic reticulum, nucleus, plasma membrane 3.7 1.8
CDY08915 Canola plasma membrane 4.63 1.77
CDY62141 Canola cytosol, endoplasmic reticulum, plasma membrane 3.7 1.76
CDY39222 Canola plasma membrane 3.7 1.72
CDY45679 Canola cytosol, golgi, plastid 2.78 1.33
CDY34800 Canola endoplasmic reticulum, plasma membrane, plastid 0.93 1.01
CDY33128 Canola plastid 1.85 0.9
CDY09377 Canola endoplasmic reticulum, plasma membrane, vacuole 1.85 0.9
CDY26756 Canola mitochondrion 1.85 0.86
VIT_01s0011g01030.t01 Wine grape peroxisome, plasma membrane, plastid 3.7 0.71
CDX76809 Canola cytosol, nucleus, peroxisome 0.93 0.65
CDY50206 Canola endoplasmic reticulum 0.93 0.48
CDY67606 Canola peroxisome 0.0 0.0
CDY69631 Canola cytosol, peroxisome, plasma membrane 0.0 0.0
CDY31231 Canola plastid 0.0 0.0
KRH16408 Soybean cytosol, extracellular, plasma membrane 0.0 0.0
Solyc02g011700.1.1 Tomato extracellular 0.0 0.0
VIT_02s0012g00950.t01 Wine grape plastid 0.0 0.0
VIT_19s0090g00010.t01 Wine grape mitochondrion 0.0 0.0
Zm00001d027407_P003 Maize cytosol 0.0 0.0
Protein Annotations
Gene3D:3.40.50.1000MapMan:35.1GO:A0A078GSZ6UniProt:A0A078GSZ6EnsemblPlants:CDY28277ProteinID:CDY28277
ProteinID:CDY28277.1GO:GO:0005575GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00040017001InterPro:HAD-like_sf
InterPro:HAD_sfInterPro:IPR023214PRINTS:PR00120PANTHER:PTHR42861PANTHER:PTHR42861:SF27InterPro:P_typ_ATPase
SUPFAM:SSF56784UniParc:UPI0004EE5326::::
Description
BnaC03g66820DBnaC03g66820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GSZ6]
Coordinates
chrLK032217:-:45049..46342
Molecular Weight (calculated)
11900.2 Da
IEP (calculated)
6.779
GRAVY (calculated)
-0.128
Length
108 amino acids
Sequence
(BLAST)
001: MGSNMYPSAS ASLFSNHKDE SLADVPVEQL IENADAFAAV FPEKKYEIVK KLQELKHICR MTGDGCSPAL KRANSGIDVA AATDYHQRIV TTQAIFQRIM
101: SYTVSALF
Best Arabidopsis Sequence Match ( AT5G57350.3 )
(BLAST)
001: MYPIQRRHYR DGIDNLLVLL IGGIPIAMPT VLSVTMAIGS HKLSQQGAIT KRMTAIEEMA GMDVLCSDKT GTLTLNKLSV DKNLIEVYCK GVEKDEVLLF
101: AARASRVENQ DAIDAAMVGM LADPKEARAG IREIHFLPFN PVDKRTALTF IDSNGNWHRV SKGAPEQILD LCNARADLRK RVHSTIDKYA ERGLRSLAVS
201: RQTVPEKTKE SSGSPWEFVG VLPLFDPPRH DSAETIRRAL DLGVNVKMIT GDQLAIAKET GRRLGMGSNM YPSSSLLGKH KDEAMAHIPV EDLIEKADGF
301: AGVFPEHKYE IVKKLQERKH ICGMTGDGVN DAPALKKADI GIAVADATDA ARGASDIVLT EPGLSVIISA VLTSRAIFQR MKNYTIYAVS ITIRIVFGFM
401: LIALIWKFDF SPFMVLIIAI LNDGTIMTIS KDRVKPSPTP DSWKLKEIFA TGVVLGGYMA IMTVVFFWAA YKTDFFPRTF HVRDLRGSEH EMMSALYLQV
501: SIVSQALIFV TRSRSWSFTE RPGYFLLIAF WVAQLIATAI AVYGNWEFAR IKGIGWGWAG VIWLYSIVFY FPLDIMKFAI RYILAGTAWK NIIDNRTAFT
601: TKQNYGIEER EAQWAHAQRT LHGLQNTETA NVVPERGGYR ELSEIANQAK RRAEIARLRE LHTLKGHVES VVKLKGLDIE TAGHYTV
Arabidopsis Description
AHA3Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UHY0]
SUBAcon: [cytosol,plasma membrane,golgi,mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.