CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, endoplasmic reticulum, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	95.94	83.26
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	84.26	74.77
CDY39222	Canola	plasma membrane	82.74	70.26
CDY34800	Canola	endoplasmic reticulum, plasma membrane, plastid	27.41	54.55
CDY35173	Canola	cytosol	85.79	52.65
CDY14177	Canola	extracellular	39.59	30.95
CDX76840	Canola	plasma membrane	18.78	27.01
CDX91747	Canola	plasma membrane	27.92	25.94
CDY08915	Canola	plasma membrane	36.04	25.09
KRH16612	Soybean	peroxisome	37.06	22.53
CDY03545	Canola	plastid	73.6	21.97
CDY30294	Canola	peroxisome	83.76	17.39
CDY64741	Canola	peroxisome	83.76	17.39
CDX82608	Canola	peroxisome	83.25	17.28
TraesCS4A01G247800.1	Wheat	plastid	25.89	15.74
CDY14186	Canola	plasma membrane	74.62	15.65
CDY28167	Canola	peroxisome	75.13	15.61
CDY56511	Canola	peroxisome	70.05	15.38
CDY45897	Canola	extracellular	7.11	15.22
CDY30730	Canola	plasma membrane	59.39	14.87
CDY39956	Canola	plasma membrane	62.94	14.4
CDX87330	Canola	plasma membrane	62.44	14.29
CDX67957	Canola	peroxisome	61.93	13.63
CDX76810	Canola	plasma membrane	58.88	13.58
CDY42259	Canola	peroxisome	64.47	13.35
CDY47940	Canola	peroxisome	64.47	13.35
CDY38294	Canola	peroxisome	64.47	13.34
CDY25913	Canola	peroxisome	64.47	13.34
CDY67153	Canola	peroxisome	60.91	13.07
CDY50939	Canola	peroxisome	62.94	13.07
CDX93092	Canola	peroxisome	62.94	13.07
CDY51651	Canola	plasma membrane	55.84	12.24
CDY51650	Canola	plasma membrane	56.35	12.2
CDX79363	Canola	plasma membrane	53.3	12.15
CDX72217	Canola	peroxisome	55.84	12.09
CDX72218	Canola	peroxisome	55.84	12.07
CDY45757	Canola	peroxisome	58.88	12.06
CDY34767	Canola	peroxisome	58.38	12.03
CDY41176	Canola	peroxisome	54.31	11.13
CDX71820	Canola	peroxisome	54.31	11.13
CDY56993	Canola	peroxisome	52.79	10.98
CDY42692	Canola	peroxisome	49.24	10.34
CDX98252	Canola	nucleus	4.06	10.13
CDX96779	Canola	plasma membrane	44.16	9.22
CDX83917	Canola	plasma membrane	44.16	9.22
CDY13569	Canola	cytosol	2.03	4.65
CDY28277	Canola	cytosol	2.03	3.7
CDY33128	Canola	plastid	3.05	2.71
CDX76809	Canola	cytosol, nucleus, peroxisome	1.02	1.31
CDY62140	Canola	peroxisome	0.51	0.15
CDY50206	Canola	endoplasmic reticulum	0.0	0.0
CDY45679	Canola	cytosol, golgi, plastid	0.0	0.0
CDY31231	Canola	plastid	0.0	0.0
CDY26756	Canola	mitochondrion	0.0	0.0
CDY24136	Canola	mitochondrion	0.0	0.0
CDY67606	Canola	peroxisome	0.0	0.0
CDY69631	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	0.0	0.0
VIT_00s2844g00010.t01	Wine grape	cytosol	0.0	0.0
Zm00001d029535_P001	Maize	cytosol, plasma membrane, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY09517	EnsemblPlantsGene:GSBRNA2T00031092001	Gene3D:1.20.1110.10	GO:A0A078F8Z7	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:ATPase_P-typ_TM_dom_sf	PANTHER:PTHR42861	PANTHER:PTHR42861:SF19	ProteinID:CDY09517	ProteinID:CDY09517.1
SUPFAM:SSF81665	TMHMM:TMhelix	UniParc:UPI0004EF21E7	UniProt:A0A078F8Z7	MapMan:35.1	:

Description

BnaC05g24020DBnaC05g24020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8Z7]

Coordinates

chrLK031997:-:11674..12668

Molecular Weight (calculated)

22841.5 Da

IEP (calculated)

9.585

GRAVY (calculated)

-0.088

Length

197 amino acids

Sequence
(BLAST)

001: MSVIFFWVIH KTDFCSDKFG VRSIRDNNDE LMFAVYLQVS NISQALIFVT RSRSWSFVER PGALLMIAFV IAQLVKGIGW GWAAVIWVYS ILTYIPQDIL
101: KFAIRYILSG KAWVSMFDKR SALTTRRDYG AGERQAEWAR EQRTQHGLQT RQEVNVFPEN EGYRELLREI HTFKGHVESV AKLKGMDIDT SGHHYTL

Best Arabidopsis Sequence Match ( AT2G18960.1 )
(BLAST)

001: MSGLEDIKNE TVDLEKIPIE EVFQQLKCTR EGLTTQEGED RIVIFGPNKL EEKKESKILK FLGFMWNPLS WVMEAAALMA IALANGDNRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TSIGNFCICS IAIGIAIEIV VMYPIQHRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDSDGNWHR VSKGAPEQIL DLANARPDLR KKVLSCIDKY AERGLRSLAV ARQVVPEKTK ESPGGPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSAALLGT DKDSNIASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGIVLGGYQ AIMSVIFFWA AHKTDFFSDK FGVRSIRDNN DELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FVIAQLVATL
801: IAVYADWTFA KVKGIGWGWA GVIWIYSIVT YFPQDILKFA IRYILSGKAW ASLFDNRTAF TTKKDYGIGE REAQWAQAQR TLHGLQPKED VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVAKLKGLDI DTAGHHYTV

Arabidopsis Description

AHA1Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VSN5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.