CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45679	Canola	cytosol, golgi, plastid	42.42	37.33
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	33.33	29.6
CDY24136	Canola	mitochondrion	33.33	27.97
CDY26756	Canola	mitochondrion	25.76	21.98
CDY50206	Canola	endoplasmic reticulum	19.19	18.1
CDY33128	Canola	plastid	18.69	16.74
GSMUA_Achr8P28430_001	Banana	endoplasmic reticulum, golgi, plasma membrane	9.6	10.61
CDY69631	Canola	cytosol, peroxisome, plasma membrane	23.23	8.78
CDY67606	Canola	peroxisome	21.21	8.28
CDY62140	Canola	peroxisome	26.26	7.58
CDY03545	Canola	plastid	23.74	7.12
CDY47940	Canola	peroxisome	31.31	6.52
CDY42259	Canola	peroxisome	31.31	6.52
CDY38294	Canola	peroxisome	30.3	6.3
CDY25913	Canola	peroxisome	30.3	6.3
CDY67153	Canola	peroxisome	27.78	5.99
CDX76810	Canola	plasma membrane	25.25	5.85
CDY30730	Canola	plasma membrane	23.23	5.84
CDY28167	Canola	peroxisome	27.78	5.8
CDY56511	Canola	peroxisome	26.26	5.8
CDX72218	Canola	peroxisome	26.26	5.71
CDY51651	Canola	plasma membrane	25.76	5.67
CDY51650	Canola	plasma membrane	25.76	5.6
CDX72217	Canola	peroxisome	25.76	5.6
CDY30294	Canola	peroxisome	26.77	5.58
CDY64741	Canola	peroxisome	26.77	5.58
CDX82608	Canola	peroxisome	26.77	5.58
CDY14186	Canola	plasma membrane	26.26	5.54
CDY34767	Canola	peroxisome	26.26	5.44
CDX93092	Canola	peroxisome	25.76	5.37
CDY50939	Canola	peroxisome	25.76	5.37
CDY45757	Canola	peroxisome	24.24	4.99
CDX96779	Canola	plasma membrane	23.74	4.98
CDX67957	Canola	peroxisome	22.22	4.92
CDX87330	Canola	plasma membrane	21.21	4.88
CDY39956	Canola	plasma membrane	21.21	4.88
CDX83917	Canola	plasma membrane	23.23	4.87
CDX79363	Canola	plasma membrane	20.71	4.75
CDY42692	Canola	peroxisome	21.21	4.48
CDX71820	Canola	peroxisome	21.72	4.47
CDY41176	Canola	peroxisome	21.72	4.47
CDY56993	Canola	peroxisome	21.21	4.44
CDX76809	Canola	cytosol, nucleus, peroxisome	2.53	3.27
CDX98252	Canola	nucleus	1.01	2.53
CDY08915	Canola	plasma membrane	3.03	2.12
CDY45897	Canola	extracellular	0.51	1.09
CDX91747	Canola	plasma membrane	1.01	0.94
CDY35173	Canola	cytosol	0.51	0.31
CDY09517	Canola	cytosol, endoplasmic reticulum, plasma membrane	0.0	0.0
CDY39222	Canola	plasma membrane	0.0	0.0
CDY34800	Canola	endoplasmic reticulum, plasma membrane, plastid	0.0	0.0
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	0.0	0.0
CDY13569	Canola	cytosol	0.0	0.0
CDY14177	Canola	extracellular	0.0	0.0
CDX76840	Canola	plasma membrane	0.0	0.0
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	0.0	0.0
CDY28277	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY31231	EnsemblPlantsGene:GSBRNA2T00047364001	Gene3D:3.40.1110.10	GO:A0A078H0F1	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:IPR023299	PANTHER:PTHR42861	PANTHER:PTHR42861:SF34	ProteinID:CDY31231
ProteinID:CDY31231.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE74A6	UniProt:A0A078H0F1	MapMan:35.1

Description

BnaC08g15260DBnaC08g15260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H0F1]

Coordinates

chrLK032269:-:110242..111430

Molecular Weight (calculated)

22296.1 Da

IEP (calculated)

10.489

GRAVY (calculated)

-0.091

Length

198 amino acids

Sequence
(BLAST)

001: MVASNNISFQ KSSIEGNQNS ASVDLRDPTR KTKLQRDFKQ RFTDIFLACS STSSGTYFLL SNFFIAVISP PSPIAITLNR LIWKGIPLVL RQKILDMCKC
101: NTRADLRNRV HLAIDKYTEP GLRSLAVARW LYVRKPKISS GGPCEFIGLL PLFGLPKYDN AYTIRRASDF GVNIQMITDS TYARYGMKHV SISISFST

Best Arabidopsis Sequence Match ( AT5G57350.3 )
(BLAST)

001: MYPIQRRHYR DGIDNLLVLL IGGIPIAMPT VLSVTMAIGS HKLSQQGAIT KRMTAIEEMA GMDVLCSDKT GTLTLNKLSV DKNLIEVYCK GVEKDEVLLF
101: AARASRVENQ DAIDAAMVGM LADPKEARAG IREIHFLPFN PVDKRTALTF IDSNGNWHRV SKGAPEQILD LCNARADLRK RVHSTIDKYA ERGLRSLAVS
201: RQTVPEKTKE SSGSPWEFVG VLPLFDPPRH DSAETIRRAL DLGVNVKMIT GDQLAIAKET GRRLGMGSNM YPSSSLLGKH KDEAMAHIPV EDLIEKADGF
301: AGVFPEHKYE IVKKLQERKH ICGMTGDGVN DAPALKKADI GIAVADATDA ARGASDIVLT EPGLSVIISA VLTSRAIFQR MKNYTIYAVS ITIRIVFGFM
401: LIALIWKFDF SPFMVLIIAI LNDGTIMTIS KDRVKPSPTP DSWKLKEIFA TGVVLGGYMA IMTVVFFWAA YKTDFFPRTF HVRDLRGSEH EMMSALYLQV
501: SIVSQALIFV TRSRSWSFTE RPGYFLLIAF WVAQLIATAI AVYGNWEFAR IKGIGWGWAG VIWLYSIVFY FPLDIMKFAI RYILAGTAWK NIIDNRTAFT
601: TKQNYGIEER EAQWAHAQRT LHGLQNTETA NVVPERGGYR ELSEIANQAK RRAEIARLRE LHTLKGHVES VVKLKGLDIE TAGHYTV

Arabidopsis Description

AHA3Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178UHY0]
SUBAcon: [mitochondrion,plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.