Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- endoplasmic reticulum 3
- golgi 2
- plasma membrane 3
- extracellular 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY50206 | Canola | endoplasmic reticulum | 32.96 | 28.1 |
| CDY09377 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 31.84 | 25.56 |
| CDY26756 | Canola | mitochondrion | 32.96 | 25.43 |
| CDY24136 | Canola | mitochondrion | 31.84 | 24.15 |
| Bra039509.1-P | Field mustard | cytosol, mitochondrion | 16.2 | 17.06 |
| CDY31231 | Canola | plastid | 10.61 | 9.6 |
| GSMUA_Achr7P19560_001 | Banana | nucleus | 8.94 | 6.4 |
| GSMUA_Achr9P13200_001 | Banana | plasma membrane | 20.11 | 3.77 |
| GSMUA_Achr7P19300_001 | Banana | cytosol, peroxisome, plasma membrane | 20.11 | 3.76 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane | 18.44 | 3.72 |
| GSMUA_Achr3P27910_001 | Banana | plasma membrane | 19.55 | 3.67 |
| GSMUA_Achr5P04450_001 | Banana | plasma membrane | 19.55 | 3.66 |
| GSMUA_Achr3P04540_001 | Banana | plasma membrane | 18.99 | 3.58 |
| GSMUA_Achr1P10350_001 | Banana | plasma membrane | 18.99 | 3.56 |
| GSMUA_Achr9P10970_001 | Banana | cytosol, peroxisome, plasma membrane | 18.99 | 3.56 |
| GSMUA_Achr2P04890_001 | Banana | cytosol, peroxisome, plasma membrane | 18.44 | 3.54 |
| GSMUA_Achr4P12650_001 | Banana | cytosol, peroxisome, plasma membrane | 17.32 | 3.54 |
| GSMUA_Achr4P22300_001 | Banana | plasma membrane | 18.44 | 3.46 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane | 16.76 | 3.4 |
| GSMUA_Achr4P22290_001 | Banana | plasma membrane | 17.88 | 3.39 |
| GSMUA_Achr4P20580_001 | Banana | cytosol, peroxisome, plasma membrane | 17.32 | 3.33 |
| GSMUA_Achr5P22720_001 | Banana | cytosol, peroxisome, plasma membrane | 15.64 | 3.25 |
| GSMUA_Achr3P13380_001 | Banana | cytosol, peroxisome, plasma membrane | 16.76 | 3.25 |
| GSMUA_AchrUn_... | Banana | cytosol, peroxisome, plasma membrane | 17.32 | 3.21 |
| GSMUA_Achr10P... | Banana | cytosol, peroxisome, plasma membrane | 16.76 | 3.14 |
| GSMUA_Achr5P05470_001 | Banana | plasma membrane | 7.82 | 1.57 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P28430_001 | EnsemblPlants:GSMUA_Achr8T28430_001 | EnsemblPlantsGene:GSMUA_Achr8G28430_001 | Gene3D:2.60.120.620 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR10869 | PANTHER:PTHR10869:SF42 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000294BD6F |
| UniProt:M0TUE6 | MapMan:35.1 | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G28430_001]
Coordinates
chr8:+:31249571..31259729
Molecular Weight (calculated)
20647.7 Da
IEP (calculated)
9.876
GRAVY (calculated)
0.221
Length
179 amino acids
Sequence
(BLAST)
(BLAST)
001: MADLQKHLKD LLKKGMEVVG SSCKKGWYRV RNLRIHREEL EVISRWLGGM MAQSKYILAL LTFITIGMII GSLFQLAFIW RLEEPSGTSH WENDKEASLL
101: RLGLVKPEIL SWSPRVILFH NFLSMEECDY LRAIAKPRLR SSTVVDIKTG KASCQSHNIL LSMIQSLLVY FFVVYVVLF
101: RLGLVKPEIL SWSPRVILFH NFLSMEECDY LRAIAKPRLR SSTVVDIKTG KASCQSHNIL LSMIQSLLVY FFVVYVVLF
001: MAPAMKIVFG LLTFVTVGMV IGSLLQLAFI NRLEDSYGTG FPSLRGLRGQ NTRYLRDVSR WANDKDAELL RIGNVKPEVV SWSPRIIVLH DFLSPEECEY
101: LKAIARPRLQ VSTVVDVKTG KGVKSDVRTS SGMFLTHVER SYPIIQAIEK RIAVFSQVPA ENGELIQVLS ADMSRSSFTN HITITLLTLS I
101: LKAIARPRLQ VSTVVDVKTG KGVKSDVRTS SGMFLTHVER SYPIIQAIEK RIAVFSQVPA ENGELIQVLS ADMSRSSFTN HITITLLTLS I
Arabidopsis Description
P4H1Prolyl 4-hydroxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZW86]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.