Factsheet for GSMUA_Achr7P19560_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
plastid 1
cytosol 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr6P21610_001
GSMUA_Achr7P19560_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G18960.1	GSMUA_Achr7P19560_001	AT2G18960.1	12182706
AT2G18960.1	GSMUA_Achr6P21610_001	AT4G27500.1	12182706
AT2G18960.1	GSMUA_Achr6P21610_001	AT4G27500.1	16279950

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	64.0	16.77
Bra024101.1-P	Field mustard	plasma membrane	57.6	15.91
Bra038835.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.4	15.91
Os04t0656100-01	Rice	plasma membrane	60.4	15.88
GSMUA_Achr3P27910_001	Banana	plasma membrane	60.4	15.83
TraesCS2A01G502400.1	Wheat	golgi	60.0	15.77
TraesCS2B01G530500.1	Wheat	peroxisome	60.0	15.77
TraesCS2D01G503000.1	Wheat	golgi, plastid, unclear	60.0	15.77
Bra010298.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.6	15.73
Bra011172.1-P	Field mustard	peroxisome	59.6	15.72
AT2G18960.1	Thale cress	peroxisome	59.6	15.7
Bra024452.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.6	15.7
GSMUA_Achr7P19300_001	Banana	cytosol, peroxisome, plasma membrane	60.0	15.67
GSMUA_Achr4P20580_001	Banana	cytosol, peroxisome, plasma membrane	58.4	15.67
PGSC0003DMT400010497	Potato	cytosol, peroxisome, plasma membrane	59.6	15.65
Bra010299.1-P	Field mustard	plasma membrane	58.4	15.55
Bra024100.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.8	15.51
GSMUA_Achr5P04450_001	Banana	plasma membrane	59.2	15.5
GSMUA_Achr9P13200_001	Banana	plasma membrane	59.2	15.48
Bra002733.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.8	15.44
GSMUA_Achr9P10970_001	Banana	cytosol, peroxisome, plasma membrane	58.8	15.39
GSMUA_Achr3P04540_001	Banana	plasma membrane	58.0	15.28
AT5G57350.1	Thale cress	peroxisome	58.0	15.28
EES11577	Sorghum	cytosol, peroxisome, plasma membrane	58.0	15.25
GSMUA_Achr1P10350_001	Banana	plasma membrane	58.0	15.2
GSMUA_Achr4P22290_001	Banana	plasma membrane	57.2	15.16
AT4G30190.2	Thale cress	peroxisome	59.2	15.09
GSMUA_Achr4P22300_001	Banana	plasma membrane	56.8	14.87
HORVU2Hr1G111640.2	Barley	plasma membrane	60.0	14.85
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	56.4	14.58
AT4G11730.1	Thale cress	peroxisome	47.2	14.51
GSMUA_Achr2P04890_001	Banana	cytosol, peroxisome, plasma membrane	53.2	14.29
GSMUA_Achr3P13380_001	Banana	cytosol, peroxisome, plasma membrane	51.6	13.96
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	38.4	10.82
GSMUA_Achr4P12650_001	Banana	cytosol, peroxisome, plasma membrane	36.4	10.4
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	36.4	10.31
GSMUA_Achr5P22720_001	Banana	cytosol, peroxisome, plasma membrane	33.2	9.63
GSMUA_Achr8P28430_001	Banana	endoplasmic reticulum, golgi, plasma membrane	6.4	8.94
Bra020447.1-P	Field mustard	plasma membrane	20.0	7.28
GSMUA_Achr5P05470_001	Banana	plasma membrane	17.6	4.92
CDY33128	Canola	plastid	2.4	2.71
Zm00001d045237_P004	Maize	cytosol	0.4	0.74

Protein Annotations

EnsemblPlants:GSMUA_Achr7P19560_001	EnsemblPlants:GSMUA_Achr7T19560_001	EnsemblPlantsGene:GSMUA_Achr7G19560_001	Gene3D:1.20.1110.10	Gene3D:2.60.120.1500	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_transduc_dom_A_sf	PANTHER:PTHR42861	PANTHER:PTHR42861:SF40
PFAM:PF00122	SUPFAM:SSF81653	SUPFAM:SSF81665	TMHMM:TMhelix	UniParc:UPI000295E042	UniProt:M0TIZ3
MapMan:35.1	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G19560_001]

Coordinates

chr7:+:22510412..22511729

Molecular Weight (calculated)

27435.1 Da

IEP (calculated)

6.709

GRAVY (calculated)

-0.114

Length

250 amino acids

Sequence
(BLAST)

001: MHQRGSNDER SSRPDSDLWT KQGRREEANF SSLFMWNSLS RVIGDGCHYG HRPGQRRKEP PGLVLKDGTW SEQDASILVP GKIVSIKLGD IIPVDTRLLE
101: GDPSEIDQSA LTAESLPVTK NPGDEVYSGS ACKQDEEQPL CIVLVCELWA AQVHHGLNFW AASPTLTSIG NLCICSIATV IVIEIIVMYP IQHRAFRDGI
201: ENLLVLLTGG IPIAMPTVLS VTTAIRSHKL SRHGAITKRM APIQNLLGLQ

Best Arabidopsis Sequence Match ( AT2G18960.1 )
(BLAST)

001: MSGLEDIKNE TVDLEKIPIE EVFQQLKCTR EGLTTQEGED RIVIFGPNKL EEKKESKILK FLGFMWNPLS WVMEAAALMA IALANGDNRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TSIGNFCICS IAIGIAIEIV VMYPIQHRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDSDGNWHR VSKGAPEQIL DLANARPDLR KKVLSCIDKY AERGLRSLAV ARQVVPEKTK ESPGGPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSAALLGT DKDSNIASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGIVLGGYQ AIMSVIFFWA AHKTDFFSDK FGVRSIRDNN DELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FVIAQLVATL
801: IAVYADWTFA KVKGIGWGWA GVIWIYSIVT YFPQDILKFA IRYILSGKAW ASLFDNRTAF TTKKDYGIGE REAQWAQAQR TLHGLQPKED VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVAKLKGLDI DTAGHHYTV

Arabidopsis Description

AHA1Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VSN5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.