Factsheet for GSMUA_Achr9P13200_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P04540_001	Banana	plasma membrane	94.14	94.84
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	85.98	92.67
GSMUA_Achr5P04450_001	Banana	plasma membrane	92.15	92.25
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	82.74	89.58
GSMUA_Achr7P19300_001	Banana	cytosol, peroxisome, plasma membrane	88.7	88.61
GSMUA_Achr3P13380_001	Banana	cytosol, peroxisome, plasma membrane	83.68	86.58
GSMUA_Achr2P04890_001	Banana	cytosol, peroxisome, plasma membrane	83.79	86.04
GSMUA_Achr1P10350_001	Banana	plasma membrane	84.94	85.12
GSMUA_Achr3P27910_001	Banana	plasma membrane	84.94	85.12
GSMUA_Achr4P12650_001	Banana	cytosol, peroxisome, plasma membrane	77.72	84.91
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	83.89	84.07
GSMUA_Achr5P22720_001	Banana	cytosol, peroxisome, plasma membrane	74.9	83.06
GSMUA_Achr4P20580_001	Banana	cytosol, peroxisome, plasma membrane	80.02	82.08
GSMUA_Achr9P10970_001	Banana	cytosol, peroxisome, plasma membrane	80.44	80.52
GSMUA_Achr4P22290_001	Banana	plasma membrane	78.66	79.75
GSMUA_Achr4P22300_001	Banana	plasma membrane	78.45	78.53
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	75.52	74.66
GSMUA_Achr7P19560_001	Banana	nucleus	15.48	59.2
VIT_15s0048g00140.t01	Wine grape	cytosol	18.72	55.76
GSMUA_Achr5P05470_001	Banana	plasma membrane	21.55	23.04
GSMUA_Achr8P28430_001	Banana	endoplasmic reticulum, golgi, plasma membrane	3.77	20.11

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150
GO:GO:0008152	GO:GO:0008553	GO:GO:0009058	GO:GO:0009987	GO:GO:0015992	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0046872	GO:GO:0120029	GO:GO:1902600
EnsemblPlantsGene:GSMUA_Achr9G13200_001	EnsemblPlants:GSMUA_Achr9P13200_001	EnsemblPlants:GSMUA_Achr9T13200_001	InterPro:HAD-like_sf	InterPro:IPR023299	UniProt:M0TZX8
InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF40	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix	UniParc:UPI000295FA98
SEG:seg	:	:	:	:	:

Description

ATPase 6, plasma membrane-type [Source:GMGC_GENE;Acc:GSMUA_Achr9G13200_001]

Coordinates

chr9:-:8590696..8594662

Molecular Weight (calculated)

104991.0 Da

IEP (calculated)

6.006

GRAVY (calculated)

0.074

Length

956 amino acids

Sequence
(BLAST)

001: MATAGGDGSI SLEQIKNESV DLERIPVEEV FAQLKCSREG LSSPEGEQRL QIFGPNKLEE KTESKFLKFL GFMWNPLSWV MEIAAIMAIA LDNGGGEPPD
101: WQDFIGIVVL LLINSTISFI EENNAGNAAA ALMAGLAPKT KVLRDDKWSE QEAAILVPGD IISIKLGDII PADARLLEGD PLKIDQSALT GESLPVTKHP
201: GDEVFSGSTC KQGEIEAIVI ATGVHTFFGK AAHLVDSTNN VGHFQKVLTA IGNFCICSIA IGMIIEIIVM YPIQHRRYRD GIDNLLVLLI GGIPIAMPTV
301: LSVTMAIGSH RLSEQGAITK RMTAIEEMAG MDVLCSDKTG TLTLNKLTVD KSLIEVFVSG LDKDSVVLYA ARASRVENQD AIDASIVNML ADPKEARAGI
401: QEVHFLPFNP VDKRTAITYI DSNGKWHRSS KGAPEQIIDL CNLRDDAKKK VHSMIDKFAE RGLRALGVAR QEVPEANKES AGGPWQFMGL LPLFDPPRHD
501: SAETIRRALD LGVNVKMITG DQLAIGKETG RRLGMGTNMY PSSTLLGEKN DDVSGLPIDE LIEKADGFAG VFPEHKYEIV KRLQDRKHIC GMTGDGVNDA
601: PALKKADIGI AVADATDAAR SASDIVLTEP GLSVIVSAVL TSRAIFQRMK NYTIYAVSIT IRIVLGFMLI ALIWRFDFSP FMVLIIAILN DGTIMTISKD
701: RVKPSPLPDS WKLREIFATG IVLGTYLALM TVVFFWLAHD TDFFPEKFGV KPIRDNLNEL TAALYLQVSI ISQALIFVTR SRSWSFVERP GLLLVTAFIA
801: AQLVATVIAA YASWGFARIQ GIGWGWAGII WLFSLVTYFP LDVLKFIIRY TLSGKAWDNL LENKTAFTTK KDYGRGEREA QWALAQRTLH GLQPADTPGL
901: FNDKSSYREL SEIAEQAKKR AEVARLRELH TLKGHVESVV KLKGLDIETI QQHYTV

Best Arabidopsis Sequence Match ( AT2G07560.1 )
(BLAST)

001: MAADISWDEI KKENVDLEKI PVDEVFQQLK CSREGLSSEE GRNRLQIFGA NKLEEKVENK FLKFLGFMWN PLSWVMEAAA IMAIVLANGG GRPPDWQDFV
101: GITCLLIINS TISFIEENNA GNAAAALMAN LAPKTKVLRD GRWGEQEAAI LVPGDLISIK LGDIVPADAR LLEGDPLKID QSALTGESLP ATKHQGDEVF
201: SGSTCKQGEI EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ KVLTAIGNFC ICSIGIGMLI EIIIMYPIQH RKYRDGIDNL LVLLIGGIPI AMPTVLSVTM
301: AIGSHRLSQQ GAITKRMTAI EEMAGMDVLC SDKTGTLTLN KLTVDKNLIE VFSKDVDKDY VILLSARASR VENQDAIDTS IVNMLGDPKE ARAGITEVHF
401: LPFNPVEKRT AITYIDTNGE WHRCSKGAPE QIIELCDLKG ETKRRAHEII DKFAERGLRS LGVARQRVPE KDKESAGTPW EFVGLLPLFD PPRHDSAETI
501: RRALDLGVNV KMITGDQLAI GKETGRRLGM GTNMYPSSSL LENKDDTTGG VPVDELIEKA DGFAGVFPEH KYEIVRKLQE RKHIVGMTGD GVNDAPALKK
601: ADIGIAVDDA TDAARSASDI VLTEPGLSVI VSAVLTSRAI FQRMKNYTIY AVSITIRIVL GFMLVALIWE FDFSPFMVLI IAILNDGTIM TISKDRVKPS
701: PIPDSWKLKE IFATGVVLGT YMALVTVVFF WLAHDTTFFS DKFGVRSLQG KDEELIAVLY LQVSIISQAL IFVTRSRSWS FVERPGLLLL IAFFVAQLIA
801: TLIATYAHWE FARIKGCGWG WCGVIWIYSI VTYIPLDILK FITRYTLSGK AWNNMIENRT AFTTKKDYGR GEREAQWALA QRTLHGLKPP ESMFEDTATY
901: TELSEIAEQA KKRAEVARLR EVHTLKGHVE SVVKLKGLDI DNLNQHYTV

Arabidopsis Description

AHA6ATPase 6, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SH76]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.