Factsheet for GSMUA_Achr3P04540_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

plasma membrane: 21334471

msms PMID: 21334471 doi

A Vertommen, AL Møller, JH Cordewener, R Swennen, B Panis, C Finnie, AH America, SC Carpentier

Laboratory of Tropical Crop Improvement, Department of Biosystems, K.U. Leuven, Kasteelpark Arenberg 13, PO box 2455, B-3001 Heverlee, Belgium.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P13200_001	Banana	plasma membrane	94.84	94.14
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	86.83	92.9
GSMUA_Achr5P04450_001	Banana	plasma membrane	92.31	91.73
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	82.93	89.13
GSMUA_Achr7P19300_001	Banana	cytosol, peroxisome, plasma membrane	89.57	88.82
GSMUA_Achr3P13380_001	Banana	cytosol, peroxisome, plasma membrane	83.98	86.26
GSMUA_Achr2P04890_001	Banana	cytosol, peroxisome, plasma membrane	83.35	84.96
GSMUA_Achr4P12650_001	Banana	cytosol, peroxisome, plasma membrane	77.98	84.57
GSMUA_Achr3P27910_001	Banana	plasma membrane	84.83	84.38
GSMUA_Achr1P10350_001	Banana	plasma membrane	84.72	84.28
GSMUA_Achr10P...	Banana	cytosol, peroxisome, plasma membrane	83.77	83.33
GSMUA_Achr5P22720_001	Banana	cytosol, peroxisome, plasma membrane	75.34	82.95
GSMUA_Achr4P20580_001	Banana	cytosol, peroxisome, plasma membrane	80.19	81.65
GSMUA_Achr9P10970_001	Banana	cytosol, peroxisome, plasma membrane	81.24	80.73
GSMUA_Achr4P22290_001	Banana	plasma membrane	79.56	80.06
GSMUA_Achr4P22300_001	Banana	plasma membrane	79.87	79.37
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	77.03	75.59
GSMUA_Achr7P19560_001	Banana	nucleus	15.28	58.0
VIT_15s0048g00140.t01	Wine grape	cytosol	18.97	56.07
GSMUA_Achr5P05470_001	Banana	plasma membrane	21.39	22.71
GSMUA_Achr8P28430_001	Banana	endoplasmic reticulum, golgi, plasma membrane	3.58	18.99

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150
GO:GO:0008152	GO:GO:0008553	GO:GO:0009058	GO:GO:0009987	GO:GO:0015992	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0046872	GO:GO:0120029	GO:GO:1902600
EnsemblPlantsGene:GSMUA_Achr3G04540_001	EnsemblPlants:GSMUA_Achr3P04540_001	EnsemblPlants:GSMUA_Achr3T04540_001	InterPro:HAD-like_sf	InterPro:IPR023299	UniProt:M0SBS2
InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF40	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix	UniParc:UPI00029679EC
SEG:seg	:	:	:	:	:

Description

ATPase 8, plasma membrane-type [Source:GMGC_GENE;Acc:GSMUA_Achr3G04540_001]

Coordinates

chr3:-:2933921..2938091

Molecular Weight (calculated)

104209.0 Da

IEP (calculated)

5.880

GRAVY (calculated)

0.112

Length

949 amino acids

Sequence
(BLAST)

001: MATDLEQIKN ESVDLESIPV EEVFAQLKCS REGLTSAEGE QRLQIFGLNK LEEKQECKVL KFLGFMWNPL SWVMEIAAIM AIALANGGGE PPDWQDFVGI
101: VVLLIINSTI SFIEENNAGN AAAALMAGLA PKTKVLRDGK WSEQEAAILV PGDIISIKLG DIVPADARLL EGDPLKIDQS ALTGESLPVT KHPGDEVFSG
201: STCKQGEIEA IVIATGVHTF FGKAAHLVDS TNNVGHFQKV LTAIGNFCIC SIAVGMLIEV IVMYPIQHRR YRDGIDNLLV LLIGGIPIAM PTVLSVTMAI
301: GSHRLSEQGA ITKRMTAIEE MAGMDVLCSD KTGTLTLNKL TVDKTLIEVF VSGLDKDSVV LYAAMASRVE NQDAIDASIV GMLADPKEAR AGIQEVHFLP
401: FNPVDKRTAI TYIDSNGKWH RSSKGAPEQI IDLCNMKDDA KKKVHAMIDK FAERGLRALG VARQEVPEAN KESAGDPWQF IGLLPLFDPP RHDSAETIRQ
501: ALHLGVNVKM ITGDQLAIGK ETGRRLGMGT NMYPSSTLLG DKNDDVTGLP IDELIEKADG FAGVFPEHKY EIVKRLQDRK HICGMTGDGV NDAPALKKAD
601: IGIAVADATD AARSASDIVL TEPGLSVIVS AVLTSRAIFQ RMKNYTIYAV SITIRIVLGF MLIALIWQFD FSPFMVLIIA ILNDGTIMTI SKDRVKPSPL
701: PDSWKLREIF ATGVVLGAYL AIMTVVFFWL AHATDFFPEK FGVRPIKDNQ EELTAALYLQ VSIISQALIF VTRSRSWSFV ERPGFLLVAA FVAAQLVATV
801: IAVYASWSFA RIQGIGWGWA GIIWLFSLIT YFPLDILKFI IRYALSGKAW DNLLQNKTAF TTKKDYGRGE REAQWALAQR TLHGLQPADT SDLFNDKSSY
901: RELSEIAEQA KRRAEVARLR ELHTLKGHVE SVVKLKGLDI ETIQQHYTV

Best Arabidopsis Sequence Match ( AT1G80660.1 )
(BLAST)

001: MAGNKDSSWD DIKNEGIDLE KIPIEEVLTQ LRCTREGLTS DEGQTRLEIF GPNKLEEKKE NKVLKFLGFM WNPLSWVMEL AAIMAIALAN GGGRPPDWQD
101: FVGITVLLII NSTISFIEEN NAGNAAAALM AGLAPKTKVL RDGKWSEQEA AILVPGDIIS IKLGDIVPAD GRLLDGDPLK IDQSALTGES LPVTKHPGQE
201: VYSGSTCKQG ELEAVVIATG VHTFFGKAAH LVDSTNQEGH FQKVLTAIGN FCICSIAIGM LIEIVVMYPI QKRAYRDGID NLLVLLIGGI PIAMPTVLSV
301: TMAIGSHRLS QQGAITKRMT AIEEMAGMDV LCSDKTGTLT LNKLTVDKSM VEVFVKDLDK DQLLVNAARA SRVENQDAID ACIVGMLGDP REAREGITEV
401: HFFPFNPVDK RTAITYIDAN GNWHRVSKGA PEQIIELCNL REDASKRAHD IIDKFADRGL RSLAVGRQTV SEKDKNSPGE PWQFLGLLPL FDPPRHDSAE
501: TIRRALDLGV NVKMITGDQL AIGKETGRRL GMGTNMYPSS ALLGQDKDES IASLPVDELI EKADGFAGVF PEHKYEIVKR LQEMKHICGM TGDGVNDAPA
601: LKRADIGIAV ADATDAARSA SDIVLTEPGL SVIVSAVLTS RAIFQRMKNY TIYAVSITIR IVMGFMLLAL IWKFDFSPFM VLIVAILNDG TIMTISKDRV
701: KPSPLPDSWK LKEIFATGVV LGTYLAVMTV VFFWAAESTD FFSAKFGVRS ISGNPHELTA AVYLQVSIVS QALIFVTRSR SWSYVERPGF WLISAFFMAQ
801: LIATLIAVYA NWNFARIRGI GWGWAGVIWL YSIVFYIPLD ILKFIIRYSL SGRAWDNVIE NKTAFTSKKD YGKGEREAQW AQAQRTLHGL QPAQTSDMFN
901: DKSTYRELSE IADQAKRRAE VARLRERHTL KGHVESVVKQ KGLDIEAIQQ HYTL

Arabidopsis Description

AHA9ATPase 9, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q42556]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.