CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
vacuole 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	23.98	23.77
CDY24136	Canola	mitochondrion	22.17	20.76
CDY31231	Canola	plastid	16.74	18.69
CDY26756	Canola	mitochondrion	17.65	16.81
CDY45679	Canola	cytosol, golgi, plastid	15.84	15.56
CDY50206	Canola	endoplasmic reticulum	10.86	11.43
CDY45897	Canola	extracellular	4.52	10.87
CDY03545	Canola	plastid	26.7	8.94
Zm00001d045237_P004	Maize	cytosol	5.43	8.89
CDY14177	Canola	extracellular	9.95	8.73
CDY69631	Canola	cytosol, peroxisome, plasma membrane	19.0	8.02
CDX76810	Canola	plasma membrane	28.96	7.49
CDY30730	Canola	plasma membrane	25.79	7.24
CDY42259	Canola	peroxisome	30.77	7.15
CDY47940	Canola	peroxisome	30.77	7.15
CDY38294	Canola	peroxisome	30.77	7.14
CDY25913	Canola	peroxisome	30.77	7.14
CDX93092	Canola	peroxisome	30.32	7.06
CDY50939	Canola	peroxisome	30.32	7.06
TraesCS2B01G530500.1	Wheat	peroxisome	30.32	7.05
TraesCS2D01G503000.1	Wheat	golgi, plastid, unclear	30.32	7.05
TraesCS2A01G502400.1	Wheat	golgi	30.32	7.05
EES11577	Sorghum	cytosol, peroxisome, plasma membrane	29.86	6.94
Os04t0656100-01	Rice	plasma membrane	29.41	6.83
CDY67153	Canola	peroxisome	28.05	6.75
CDY28167	Canola	peroxisome	28.96	6.75
HORVU2Hr1G111640.2	Barley	plasma membrane	30.77	6.73
PGSC0003DMT400010497	Potato	cytosol, peroxisome, plasma membrane	28.96	6.72
CDY14186	Canola	plasma membrane	28.51	6.71
CDY34767	Canola	peroxisome	28.96	6.69
CDX96779	Canola	plasma membrane	28.51	6.67
CDX83917	Canola	plasma membrane	28.51	6.67
CDX91747	Canola	plasma membrane	6.33	6.6
CDX72217	Canola	peroxisome	27.15	6.59
CDX72218	Canola	peroxisome	27.15	6.59
CDY51651	Canola	plasma membrane	26.7	6.56
CDY62140	Canola	peroxisome	20.36	6.56
CDY51650	Canola	plasma membrane	26.7	6.48
CDX82608	Canola	peroxisome	27.6	6.43
CDY56511	Canola	peroxisome	25.79	6.35
CDY45757	Canola	peroxisome	27.6	6.34
CDY56993	Canola	peroxisome	27.15	6.34
CDX98252	Canola	nucleus	2.26	6.33
CDY64741	Canola	peroxisome	27.15	6.32
CDY30294	Canola	peroxisome	27.15	6.32
CDY67606	Canola	peroxisome	14.48	6.31
CDX71820	Canola	peroxisome	27.15	6.24
CDY41176	Canola	peroxisome	27.15	6.24
CDY42692	Canola	peroxisome	26.24	6.18
CDX76840	Canola	plasma membrane	3.62	5.84
CDX67957	Canola	peroxisome	23.53	5.81
CDX87330	Canola	plasma membrane	22.62	5.81
CDY39956	Canola	plasma membrane	22.62	5.81
CDX79363	Canola	plasma membrane	22.17	5.67
CDY08915	Canola	plasma membrane	7.24	5.65
CDY35173	Canola	cytosol	6.79	4.67
CDY09517	Canola	cytosol, endoplasmic reticulum, plasma membrane	2.71	3.05
GSMUA_Achr7P19560_001	Banana	nucleus	2.71	2.4
CDY13569	Canola	cytosol	0.9	2.33
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	2.26	2.2
CDX76809	Canola	cytosol, nucleus, peroxisome	1.36	1.96
CDY28277	Canola	cytosol	0.9	1.85
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	1.81	1.8
CDY39222	Canola	plasma membrane	1.81	1.72
CDY34800	Canola	endoplasmic reticulum, plasma membrane, plastid	0.45	1.01

Protein Annotations

EnsemblPlants:CDY33128	EnsemblPlantsGene:GSBRNA2T00053817001	PANTHER:PTHR42861	PANTHER:PTHR42861:SF11	ProteinID:CDY33128	ProteinID:CDY33128.1
SEG:seg	UniParc:UPI0004EB1522	UniProt:A0A078H8E1	MapMan:35.2	:	:

Description

BnaC09g22240DBnaC09g22240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H8E1]

Coordinates

chrLK032306:-:437064..438869

Molecular Weight (calculated)

24847.2 Da

IEP (calculated)

9.609

GRAVY (calculated)

-0.060

Length

221 amino acids

Sequence
(BLAST)

001: MNTFLFCNEF SNSHQSQLLS RTLRLPCLLS KLDASVVRVL SDFKDLRPEG VKRKAFVEQL KADLGSYHGY NEFLIGTLTS LFIFLISATQ ELICGVIYGI
101: DKYAGPQKFV GGLPLSDPPR HDSAYTIRRA FQTSLSTSMI TVDHLAIAKE TRPKLGMGSK RIHSISFSTW IRNPSLKTMY VLPNSLSFCR GFVLNRGNNM
201: LRHGNVGDLY EECLDVVKMT N

Best Arabidopsis Sequence Match ( AT3G47950.1 )
(BLAST)

001: MTTTVEDNRE VLEAVLKEAV DLENVPIEEV FENLRCSKEG LTTQAADERL ALFGHNKLEE KKESKFLKFL GFMWNPLSWV MEAAAIMAIA LANGGGKPPD
101: WQDFVGIITL LVINSTISFI EENNAGNAAA ALMARLAPKA KVLRDGRWGE QDAAILVPGD IISIKLGDIV PADARLLEGD PLKIDQSALT GESLPVTKSS
201: GDGVYSGSTC KQGEIEAVVI ATGVHTFFGK AAHLVDTTNQ IGHFQQVLTA IGNFCICSIA VGMLIEIVVM YPIQHRAYRP GIDNLLVLLI GGIPIAMPTV
301: LSVTMAIGSH RLSQQGAITK RMTAIEEMAG MDVLCSDKTG TLTLNKLTVD KNLIEVFMKG VDADTVVLMA ARASRLENQD AIDAAIVGML ADPKDARAGI
401: QEVHFLPFNP TDKRTALTYI DNEGNTHRVS KGAPEQILNL AHNKSEIERR VHAVIDKFAE RGLRSLAVAY QDVPEGRKDS AGGPWQFVGL MPLFDPPRHD
501: SAETIRRALN LGVSVKMITG DQLAIGKETG RRLGMGTNMY PSSALLGQNK DESIVALPVD ELIEKADGFA GVFPEHKYEI VKRLQARKHI CGMTGDGVND
601: APALKKADIG IAVADATDAA RSASDIVLTE PGLSVIISAV LTSRAIFQRM KNYTIYAVSI TIRIVLGFML LALIWQFDFP PFMVLIIAIL NDGTIMTISK
701: DRVKPSPLPD SWKLSEIFAT GVVFGSYMAM MTVIFFWVSY KTDFFPRTFG VATLEKTAHD DFRKLASAIY LQVSIISQAL IFVTRSRSWS FVERPGIFLM
801: IAFILAQLVA TLIAVYANWS FAAIEGIGWG WAGVIWLYNI IFYIPLDFIK FFIRYALSGR AWDLVIEQRV AFTRQKDFGK EQRELQWAHA QRTLHGLQAP
901: DTKMFTDRTH VSELNQMAEE AKRRAEIARL RELHTLKGHV ESVVRLKGLD IETIQQAYTV

Arabidopsis Description

AHA4Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VFQ4]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.