CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH16357	Soybean	cytosol	36.6	29.17
CDY67606	Canola	peroxisome	67.32	20.32
CDY69631	Canola	cytosol, peroxisome, plasma membrane	67.32	19.66
CDY34767	Canola	peroxisome	95.42	15.27
CDY62140	Canola	peroxisome	55.56	12.39
CDY67153	Canola	peroxisome	70.59	11.76
CDX72217	Canola	peroxisome	69.93	11.76
CDY51650	Canola	plasma membrane	69.93	11.76
CDX72218	Canola	peroxisome	69.93	11.75
CDX82608	Canola	peroxisome	71.24	11.49
CDY28167	Canola	peroxisome	70.59	11.39
CDY64741	Canola	peroxisome	70.59	11.38
CDY30294	Canola	peroxisome	70.59	11.38
CDX67957	Canola	peroxisome	66.01	11.28
CDY47940	Canola	peroxisome	69.93	11.25
CDY42259	Canola	peroxisome	69.93	11.25
CDY25913	Canola	peroxisome	69.93	11.24
CDY38294	Canola	peroxisome	69.93	11.24
CDY51651	Canola	plasma membrane	65.36	11.12
CDY42692	Canola	peroxisome	66.67	10.87
CDY41176	Canola	peroxisome	67.32	10.72
CDX71820	Canola	peroxisome	67.32	10.72
CDY45757	Canola	peroxisome	66.67	10.6
CDY56993	Canola	peroxisome	65.36	10.56
CDX93092	Canola	peroxisome	65.36	10.54
CDY50939	Canola	peroxisome	65.36	10.54
CDY39956	Canola	plasma membrane	58.17	10.34
CDX83917	Canola	plasma membrane	63.4	10.28
CDX96779	Canola	plasma membrane	63.4	10.28
CDY14186	Canola	plasma membrane	62.75	10.22
CDX87330	Canola	plasma membrane	57.52	10.22
CDX79363	Canola	plasma membrane	55.56	9.84
CDY56511	Canola	peroxisome	56.86	9.7
CDY50206	Canola	endoplasmic reticulum	7.84	5.71
CDY24136	Canola	mitochondrion	8.5	5.51
CDY26756	Canola	mitochondrion	7.84	5.17
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	7.19	4.93
CDX98252	Canola	nucleus	1.96	3.8
CDY45679	Canola	cytosol, golgi, plastid	3.92	2.67
CDY31231	Canola	plastid	3.27	2.53
CDX76810	Canola	plasma membrane	11.76	2.11
CDY14177	Canola	extracellular	3.27	1.98
CDY08915	Canola	plasma membrane	2.61	1.41
CDY33128	Canola	plastid	1.96	1.36
CDY13569	Canola	cytosol	0.65	1.16
CDY30730	Canola	plasma membrane	5.23	1.02
CDY09517	Canola	cytosol, endoplasmic reticulum, plasma membrane	1.31	1.02
CDY28277	Canola	cytosol	0.65	0.93
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	1.31	0.9
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	1.31	0.88
CDY39222	Canola	plasma membrane	1.31	0.86
CDY35173	Canola	cytosol	1.31	0.62
CDY34800	Canola	endoplasmic reticulum, plasma membrane, plastid	0.0	0.0
CDY45897	Canola	extracellular	0.0	0.0
CDX91747	Canola	plasma membrane	0.0	0.0
CDX76840	Canola	plasma membrane	0.0	0.0
CDY03545	Canola	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDX76809	EnsemblPlantsGene:GSBRNA2T00127310001	Gene3D:1.20.1110.10	GO:A0A078CL98	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N
PANTHER:PTHR42861	PANTHER:PTHR42861:SF41	PFAM:PF00690	ProteinID:CDX76809	ProteinID:CDX76809.1	SEG:seg
SMART:SM00831	SUPFAM:SSF81665	TMHMM:TMhelix	UniParc:UPI0004EF3AE6	MapMan:35.1	:

Description

BnaC08g33950D

Coordinates

chrLK031808:+:1214181..1215223

Molecular Weight (calculated)

16764.5 Da

IEP (calculated)

4.797

GRAVY (calculated)

0.127

Length

153 amino acids

Sequence
(BLAST)

001: MAAAADKGNE LDHIKNEAVD LIRIPMEEVF EELKCTKQGL TSDEASYRLD LFGPNKLEEK KKSKIIKFLG FMWNPLSWVM EAAALMAIAL ANGGGRPPDW
101: EDFVGIVGLL FINSTISFIE ENNAGNAAAA LMAGLACRTK VIPVIRIQLQ LLS

Best Arabidopsis Sequence Match ( AT2G07560.1 )
(BLAST)

001: MAADISWDEI KKENVDLEKI PVDEVFQQLK CSREGLSSEE GRNRLQIFGA NKLEEKVENK FLKFLGFMWN PLSWVMEAAA IMAIVLANGG GRPPDWQDFV
101: GITCLLIINS TISFIEENNA GNAAAALMAN LAPKTKVLRD GRWGEQEAAI LVPGDLISIK LGDIVPADAR LLEGDPLKID QSALTGESLP ATKHQGDEVF
201: SGSTCKQGEI EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ KVLTAIGNFC ICSIGIGMLI EIIIMYPIQH RKYRDGIDNL LVLLIGGIPI AMPTVLSVTM
301: AIGSHRLSQQ GAITKRMTAI EEMAGMDVLC SDKTGTLTLN KLTVDKNLIE VFSKDVDKDY VILLSARASR VENQDAIDTS IVNMLGDPKE ARAGITEVHF
401: LPFNPVEKRT AITYIDTNGE WHRCSKGAPE QIIELCDLKG ETKRRAHEII DKFAERGLRS LGVARQRVPE KDKESAGTPW EFVGLLPLFD PPRHDSAETI
501: RRALDLGVNV KMITGDQLAI GKETGRRLGM GTNMYPSSSL LENKDDTTGG VPVDELIEKA DGFAGVFPEH KYEIVRKLQE RKHIVGMTGD GVNDAPALKK
601: ADIGIAVDDA TDAARSASDI VLTEPGLSVI VSAVLTSRAI FQRMKNYTIY AVSITIRIVL GFMLVALIWE FDFSPFMVLI IAILNDGTIM TISKDRVKPS
701: PIPDSWKLKE IFATGVVLGT YMALVTVVFF WLAHDTTFFS DKFGVRSLQG KDEELIAVLY LQVSIISQAL IFVTRSRSWS FVERPGLLLL IAFFVAQLIA
801: TLIATYAHWE FARIKGCGWG WCGVIWIYSI VTYIPLDILK FITRYTLSGK AWNNMIENRT AFTTKKDYGR GEREAQWALA QRTLHGLKPP ESMFEDTATY
901: TELSEIAEQA KKRAEVARLR EVHTLKGHVE SVVKLKGLDI DNLNQHYTV

Arabidopsis Description

AHA6ATPase 6, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SH76]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.