CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	extracellular, plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45897	Canola	extracellular	24.82	36.96
Zm00001d035826_P001	Maize	peroxisome, plasma membrane, plastid, vacuole	40.15	29.1
CDX91747	Canola	plasma membrane	35.04	22.64
CDY34800	Canola	endoplasmic reticulum, plasma membrane, plastid	15.33	21.21
CDY35173	Canola	cytosol	46.72	19.94
CDY62141	Canola	cytosol, endoplasmic reticulum, plasma membrane	32.85	19.82
CDX96220	Canola	endoplasmic reticulum, nucleus, plasma membrane	31.39	19.37
CDY09517	Canola	cytosol, endoplasmic reticulum, plasma membrane	27.01	18.78
CDY39222	Canola	plasma membrane	31.39	18.53
CDY08915	Canola	plasma membrane	37.23	18.02
CDY14177	Canola	extracellular	28.47	15.48
CDY03545	Canola	plastid	56.93	11.82
CDY30730	Canola	plasma membrane	51.82	9.02
CDY14186	Canola	plasma membrane	55.47	8.09
CDY30294	Canola	peroxisome	54.01	7.8
CDY64741	Canola	peroxisome	54.01	7.8
CDY39956	Canola	plasma membrane	48.91	7.78
CDY28167	Canola	peroxisome	53.28	7.7
CDX82608	Canola	peroxisome	52.55	7.59
CDX87330	Canola	plasma membrane	47.45	7.55
CDY50939	Canola	peroxisome	51.82	7.48
CDX79363	Canola	plasma membrane	46.72	7.41
CDX93092	Canola	peroxisome	51.09	7.38
CDX67957	Canola	peroxisome	48.18	7.37
CDY51650	Canola	plasma membrane	48.91	7.36
CDY45757	Canola	peroxisome	51.09	7.28
CDX76810	Canola	plasma membrane	45.26	7.26
CDY51651	Canola	plasma membrane	47.45	7.23
CDX72218	Canola	peroxisome	47.45	7.14
CDX72217	Canola	peroxisome	46.72	7.03
CDY67153	Canola	peroxisome	46.72	6.97
CDY56993	Canola	peroxisome	45.99	6.65
CDY42692	Canola	peroxisome	45.26	6.61
CDX71820	Canola	peroxisome	45.99	6.56
CDY41176	Canola	peroxisome	45.99	6.56
CDY34767	Canola	peroxisome	45.26	6.49
CDY47940	Canola	peroxisome	44.53	6.41
CDY42259	Canola	peroxisome	44.53	6.41
CDY25913	Canola	peroxisome	43.8	6.3
CDY38294	Canola	peroxisome	43.8	6.3
HORVU0Hr1G009560.11	Barley	peroxisome	43.07	6.0
TraesCS5A01G543300.1	Wheat	peroxisome	42.34	5.95
Solyc08g078200.1.1	Tomato	plastid	41.61	5.9
Os03t0100800-01	Rice	plasma membrane	41.61	5.88
TraesCS4B01G376400.1	Wheat	peroxisome	41.61	5.83
PGSC0003DMT400088585	Potato	cytosol, peroxisome, plasma membrane	40.88	5.8
CDX83917	Canola	plasma membrane	39.42	5.72
CDX96779	Canola	plasma membrane	37.96	5.51
KXG40431	Sorghum	plasma membrane	39.42	5.38
CDY56511	Canola	peroxisome	32.85	5.02
CDX98252	Canola	nucleus	2.19	3.8
CDY33128	Canola	plastid	5.84	3.62
CDY13569	Canola	cytosol	2.19	3.49
CDY28277	Canola	cytosol	2.19	2.78
CDY09377	Canola	endoplasmic reticulum, plasma membrane, vacuole	2.19	1.35
CDY26756	Canola	mitochondrion	2.19	1.29
Zm00001d019307_P001	Maize	cytosol	0.73	0.93
CDY62140	Canola	peroxisome	2.19	0.44
CDY67606	Canola	peroxisome	1.46	0.39
CDY69631	Canola	cytosol, peroxisome, plasma membrane	1.46	0.38
VIT_00s2642g00010.t01	Wine grape	cytosol, peroxisome	0.0	0.0
CDY24136	Canola	mitochondrion	0.0	0.0
CDX76809	Canola	cytosol, nucleus, peroxisome	0.0	0.0
CDY50206	Canola	endoplasmic reticulum	0.0	0.0
CDY31231	Canola	plastid	0.0	0.0
CDY45679	Canola	cytosol, golgi, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDX76840	EnsemblPlantsGene:GSBRNA2T00127347001	Gene3D:1.20.1110.10	GO:A0A078CIX4	InterPro:ATPase_P-typ_TM_dom_sf	PANTHER:PTHR42861
PANTHER:PTHR42861:SF19	ProteinID:CDX76840	ProteinID:CDX76840.1	SUPFAM:SSF81665	TMHMM:TMhelix	UniParc:UPI0004EF26B9
MapMan:35.1	:	:	:	:	:

Description

BnaC08g34260D

Coordinates

chrLK031808:-:1367821..1368489

Molecular Weight (calculated)

15877.5 Da

IEP (calculated)

10.002

GRAVY (calculated)

0.149

Length

137 amino acids

Sequence
(BLAST)

001: MTISKYRVKP SPTPDSWKLR EIFATGVVLG NYLAIRTLIF FLVAHKTDFF SETFGVKSIR DRSWSFVERP GALLMIVFLI EQLVATLIAV YTNWGIRKSY
101: GYWMGCSDLA IQYYNILPIG HSQVCHSIHV DRERKLR

Best Arabidopsis Sequence Match ( AT4G30190.1 )
(BLAST)

001: MSSLEDIKNE TVDLEKIPIE EVFQQLKCSR EGLTTQEGED RIQIFGPNKL EEKKESKLLK FLGFMWNPLS WVMEMAAIMA IALANGDGRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TAIGNFCICS IAIGMVIEII VMYPIQRRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDGSGNWHR VSKGAPEQIL ELAKASNDLS KKVLSIIDKY AERGLRSLAV ARQVVPEKTK ESPGAPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSSALLGT HKDANLASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGVVLGGYQ AIMTVIFFWA AHKTDFFSDT FGVRSIRDNN HELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FLIAQLIATL
801: IAVYANWEFA KIRGIGWGWA GVIWLYSIVT YFPLDVFKFA IRYILSGKAW LNLFENKTAF TMKKDYGKEE REAQWALAQR TLHGLQPKEA VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVVKLKGLDI ETPSHYTV

Arabidopsis Description

HA2Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:F4JPJ7]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.