Factsheet for VIT_00s2642g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol

Predictor Summary:

cytosol 2
plastid 1
peroxisome 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0048g00170.t01	Wine grape	cytosol, mitochondrion	27.64	61.82
VIT_00s2844g00010.t01	Wine grape	cytosol	30.89	47.5
Zm00001d019307_P001	Maize	cytosol	15.04	34.58
VIT_15s0048g00140.t01	Wine grape	cytosol	42.68	32.71
VIT_02s0025g03330.t01	Wine grape	peroxisome	79.27	22.47
VIT_15s0021g01660.t01	Wine grape	cytosol, peroxisome, plasma membrane	78.46	20.15
PGSC0003DMT400088585	Potato	cytosol, peroxisome, plasma membrane	78.86	20.08
Solyc08g078200.1.1	Tomato	plastid	78.86	20.08
VIT_14s0066g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.02	19.58
Os03t0100800-01	Rice	plasma membrane	76.83	19.48
VIT_17s0000g05540.t01	Wine grape	extracellular	75.61	19.46
VIT_04s0008g02460.t01	Wine grape	cytosol, peroxisome, plasma membrane	74.39	19.18
TraesCS4B01G376400.1	Wheat	peroxisome	75.61	19.04
TraesCS5A01G543300.1	Wheat	peroxisome	75.2	18.97
HORVU0Hr1G009560.11	Barley	peroxisome	75.61	18.92
VIT_11s0052g00620.t01	Wine grape	extracellular	72.76	18.76
VIT_09s0002g00130.t01	Wine grape	plasma membrane	72.36	18.7
KXG40431	Sorghum	plasma membrane	75.61	18.53
VIT_11s0149g00210.t01	Wine grape	extracellular	71.14	18.38
Bra007524.1-P	Field mustard	cytosol, peroxisome, plasma membrane	71.54	18.31
AT3G60330.4	Thale cress	cytosol, peroxisome, plasma membrane	70.33	18.0
VIT_09s0002g02260.t01	Wine grape	cytosol, peroxisome, plasma membrane	69.51	17.85
Bra014496.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.29	17.74
VIT_07s0191g00260.t01	Wine grape	cytosol, plasma membrane	20.73	13.67
VIT_02s0025g03360.t01	Wine grape	peroxisome	4.07	6.58
Zm00001d035826_P001	Maize	peroxisome, plasma membrane, plastid, vacuole	4.07	5.29
VIT_01s0011g01030.t01	Wine grape	peroxisome, plasma membrane, plastid	9.35	4.06
VIT_00s0477g00070.t01	Wine grape	plastid	4.07	1.79
VIT_02s0012g00950.t01	Wine grape	plastid	1.63	1.7
VIT_19s0090g00010.t01	Wine grape	mitochondrion	0.41	1.43
VIT_02s0488g00010.t01	Wine grape	cytosol	0.0	0.0
VIT_00s0760g00010.t01	Wine grape	endoplasmic reticulum, plasma membrane	0.0	0.0
CDX76840	Canola	plasma membrane	0.0	0.0

Protein Annotations

EntrezGene:100244257	wikigene:100244257	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_cyto_dom_N
ProteinID:CCB57487	ProteinID:CCB57487.1	UniProt:F6HS28	EMBL:FN596237	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100244257	wikigene:LOC100244257	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	PANTHER:PTHR42861	PANTHER:PTHR42861:SF11	InterPro:P_typ_ATPase	SUPFAM:SSF56784	SUPFAM:SSF81660
TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI0002108B80	ArrayExpress:VIT_00s2642g00010	EnsemblPlantsGene:VIT_00s2642g00010	EnsemblPlants:VIT_00s2642g00010.t01
RefSeq:XP_002269828	RefSeq:XP_002269828.2	:	:	:	:

Description

No Description!

Coordinates

chrUn:+:42578832..42580809

Molecular Weight (calculated)

26433.2 Da

IEP (calculated)

6.632

GRAVY (calculated)

0.183

Length

246 amino acids

Sequence
(BLAST)

001: ILNLAHNKSD IERRVHSIIN KFAEHGLRSL AVACQEVPAG TKDSPGGPWE FVGLLPLADL PRVDSALTIR GAVDLGVSVK MITGDQMAIA KETGRQLGMG
101: TNMYPSSSLL GHNKDQSVAT LPVDELIEKA DGFAGVFPEH KYEIVMQLQS RKHIVGLTGY GVNDAPALQK ADIGFAVADS TDAARGASDI ILIHPGLTAI
201: ISAVSTSRSI IQMMKTYSLG FLMLTAFWKF NFPPFMVLII AIFNDG

Best Arabidopsis Sequence Match ( AT2G24520.4 )
(BLAST)

001: MYPIQRRRYR DGIDNLLVLL IGGIPIAMPS VLSVTMATGS HRLFQQGAIT KRMTAIEEMA GMDVLCCDKT GTLTLNKLTV DKNLVEVFAK GVGKEHVFLL
101: AARASRIENQ DAIDAAIVGM LADPKEARAG VREVHFFPFN PVDKRTALTY VDSDGNWHRA SKGAPEQILN LCNCKEDVRR KVHGVIDKFA ERGLRSLAVA
201: RQEVLEKKKD APGGPWQLVG LLPLFDPPRH DSAETIRRAL NLGVNVKMIT GDQLAIGKET GRRLGMGTNM YPSSALLGQV KDSSLGALPV DELIEKADGF
301: AGVFPEHKYE IVHRLQQRNH ICGMTGDGVN DAPALKKADI GIAVVDATDA ARGASDIVLT EPGLSVIISA VLTSRAIFQR MKNYTIYAVS ITIRIVFGFM
401: FIALIWQFDF SPFMVLIIAI LNDGTIMTIS KDRMKPSPQP DSWKLRDIFS TGVVLGGYQA LMTVVFFWVM KDSDFFSNYF GVRPLSQRPE QMMAALYLQV
501: SIISQALIFV TRSRSWSYAE CPGLLLLGAF VIAQLVATFI AVYANWSFAR IEGAGWGWAG VIWLYSFLTY IPLDLLKFGI RYVLSGKAWL NLLENKTAFT
601: TKKDYGKEER EAQWAAAQRT LHGLQPAEKN NIFNEKNSYS ELSQIAEQAK RRAEVVRLRE INTLKGHVES VVKLKGLDID TIQQHYTV

Arabidopsis Description

AHA5H(+)-ATPase 5 [Source:TAIR;Acc:AT2G24520]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.