Factsheet for VIT_11s0052g00620.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

extracellular: 27664331

msms PMID: 27664331 doi

P Pérez-Bermúdez, J Blesa, JM Soriano, A Marcilla

Departament de Biologia Vegetal, Facultat de Farmàcia, Universitat de València, Burjassot, Valencia, Spain., Grupo de Ciencias de la Alimentación Basada en la Evidencia y Experimentación (CiAlBEx), Instituto de Ciencias de los Materiales, Parque Científico, Universitat de València, Paterna, Spain; Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain., Unidad Mixta de Investigación en Endocrinología, Nutrición y Dietética Clínica, Instituto de Investigación Sanitaria La Fe-Universitat de València, Valencia, Spain; Àrea de Parasitologia, Departament de Farmàcia i Tecnologia Farmacèutica i Parasitologia, Universitat de València, Burjassot, Valencia, Spain. Electronic address: antonio.marcilla@uv.es.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12255	Soybean	endoplasmic reticulum	92.24	92.15
VIT_04s0008g02460.t01	Wine grape	cytosol, peroxisome, plasma membrane	92.03	92.03
KRH02845	Soybean	endoplasmic reticulum	91.3	91.4
KRH19045	Soybean	endoplasmic reticulum	90.04	90.52
VIT_11s0149g00210.t01	Wine grape	extracellular	87.32	87.5
KRH37283	Soybean	plasma membrane	91.93	86.23
VIT_09s0002g02260.t01	Wine grape	cytosol, peroxisome, plasma membrane	84.91	84.55
VIT_17s0000g05540.t01	Wine grape	extracellular	81.76	81.59
VIT_14s0066g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	81.55	81.47
VIT_19s0090g00010.t01	Wine grape	mitochondrion	5.97	81.43
VIT_09s0002g00130.t01	Wine grape	plasma membrane	78.93	79.1
VIT_15s0021g01660.t01	Wine grape	cytosol, peroxisome, plasma membrane	76.21	75.89
VIT_00s2844g00010.t01	Wine grape	cytosol	12.68	75.62
VIT_00s2642g00010.t01	Wine grape	cytosol, peroxisome	18.76	72.76
VIT_15s0048g00170.t01	Wine grape	cytosol, mitochondrion	7.86	68.18
VIT_02s0025g03330.t01	Wine grape	peroxisome	61.53	67.63
VIT_02s0488g00010.t01	Wine grape	cytosol	12.16	62.37
VIT_00s0760g00010.t01	Wine grape	endoplasmic reticulum, plasma membrane	10.06	57.14
VIT_02s0012g00950.t01	Wine grape	plastid	13.94	56.6
VIT_15s0048g00140.t01	Wine grape	cytosol	18.97	56.39
VIT_02s0025g03360.t01	Wine grape	peroxisome	7.97	50.0
VIT_01s0011g01030.t01	Wine grape	peroxisome, plasma membrane, plastid	22.85	38.52
VIT_07s0191g00260.t01	Wine grape	cytosol, plasma membrane	9.54	24.4
VIT_00s0477g00070.t01	Wine grape	plastid	12.26	20.89

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	EntrezGene:100242786	wikigene:100242786	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10
Gene3D:3.40.50.1000	EMBL:AM487422	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N
InterPro:ATPase_P-typ_transduc_dom_A_sf	ProteinID:CAN64375	ProteinID:CAN64375.1	ProteinID:CBI17862	ProteinID:CBI17862.3	ncoils:Coil
UniProt:D7SQD1	EMBL:FN594964	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006139
GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0008553
GO:GO:0009058	GO:GO:0009987	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0046872	GO:GO:0120029	GO:GO:1902600	InterPro:HAD-like_sf	InterPro:HAD_sf
InterPro:IPR023214	InterPro:IPR023299	EntrezGene:LOC100242786	wikigene:LOC100242786	InterPro:P-type_ATPase_IIIA	PFAM:PF00122
PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861
PANTHER:PTHR42861:SF41	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665
TIGR:TC68100	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix	UniParc:UPI00015CC1CD	ArrayExpress:VIT_11s0052g00620
EnsemblPlantsGene:VIT_11s0052g00620	EnsemblPlants:VIT_11s0052g00620.t01	unigene:Vvi.9283	RefSeq:XP_002267501	RefSeq:XP_002267501.1	RefSeq:XP_003633201
RefSeq:XP_003633201.1	SEG:seg	:	:	:	:

Description

Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:D7SQD1]

Coordinates

chr11:+:18105273..18111364

Molecular Weight (calculated)

105172.0 Da

IEP (calculated)

7.014

GRAVY (calculated)

0.075

Length

954 amino acids

Sequence
(BLAST)

001: MGGDKSISLE EIKNETVDLE KIPIEEVFEQ LKCTKEGLTS QEGEARLQIF GPNKLEEKKE SKFLKFLGFM WNPLSWVMEA AALMAIVLAN GDGQPPDWQD
101: FVGIVCLLVI NSTISFIEEN NAGNAAAALM AGLAPKTKVL RDGRWSEQDA AILVPGDIIS IKLGDIIPAD ARLLEGDPLK VDQSALTGES LPVTKHPSDE
201: VFSGSTCKQG EIEAVVIATG VHTFFGKAAH LVDSTNQVGH FQKVLTAIGN FCICSIAVGM LVEIIVMYPI QHRKYRDGID NLLVLLIGGI PIAMPTVLSV
301: TMAIGSHRLS QQGAITKRMT AIEEMAGMDV LCSDKTGTLT LNKLSVDRNL VEVFAKGVDK EHVLLLAARA SRTENQDAID AAIVGMLADP KEARAGIREV
401: HFLPFNPVDK RTALTYIDAD GKWHRASKGA PEQILDLCKC KEDVKKKAHS IIDKFAERGL RSLAVGRQEV PEKSKESLGS PWQFVGLLPL FDPPRHDSAE
501: TIRRALNLGV NVKMITGDQL AIAKETGRRL GMGTNMYPSA SLLGQDKDAS IAALPVEELI EKADGFAGVF PEHKYEIVKK LQERKHICGM TGDGVNDAPA
601: LKKADIGIAV ADATDAARGA SDIVLTEPGL SVIISAVLTS RAIFQRMKNY TIYAVSITIR IVFGFLFIAL IWKFDFSPFM VLIIAILNDG TIMTISKDRV
701: KPSPLPDSWK LREIFATGVV LGGYLALMTV IFFWVMKDTD FFPDKFGVKS IRDSPHEMMA ALYLQVSVVS QALIFVTRSR SWSFVERPGL LLVTAFIIAQ
801: LVATLIAVYA NWGFARIKGM GWGWAGVVWI YSVVFYVPLD FIKFFIRYIL SGKAWLNLLE NKTAFTTKKD YGKEEREAQW ALAQRTLHGL QPPETSNLFN
901: DKNSYRELSE IAEQAKRRAE VARLRELHTL KGHVESVVKL KGLDIDTIQQ HYTV

Best Arabidopsis Sequence Match ( AT4G30190.1 )
(BLAST)

001: MSSLEDIKNE TVDLEKIPIE EVFQQLKCSR EGLTTQEGED RIQIFGPNKL EEKKESKLLK FLGFMWNPLS WVMEMAAIMA IALANGDGRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TAIGNFCICS IAIGMVIEII VMYPIQRRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDGSGNWHR VSKGAPEQIL ELAKASNDLS KKVLSIIDKY AERGLRSLAV ARQVVPEKTK ESPGAPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSSALLGT HKDANLASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGVVLGGYQ AIMTVIFFWA AHKTDFFSDT FGVRSIRDNN HELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FLIAQLIATL
801: IAVYANWEFA KIRGIGWGWA GVIWLYSIVT YFPLDVFKFA IRYILSGKAW LNLFENKTAF TMKKDYGKEE REAQWALAQR TLHGLQPKEA VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVVKLKGLDI ETPSHYTV

Arabidopsis Description

HA2Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:F4JPJ7]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.