CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02845	Soybean	endoplasmic reticulum	94.03	94.23
KRH19045	Soybean	endoplasmic reticulum	92.88	93.47
KRH37283	Soybean	plasma membrane	99.06	93.02
VIT_11s0052g00620.t01	Wine grape	extracellular	92.15	92.24
KRH04967	Soybean	plasma membrane	89.42	89.8
KRH16128	Soybean	endoplasmic reticulum, mitochondrion, nucleus	89.42	89.8
KRH52590	Soybean	cytosol, peroxisome, plasma membrane	88.27	88.64
KRH61927	Soybean	endoplasmic reticulum, mitochondrion	88.17	88.54
KRH47385	Soybean	endoplasmic reticulum	85.86	86.41
KRH44521	Soybean	endoplasmic reticulum	84.71	85.25
KRH09668	Soybean	endoplasmic reticulum	84.19	84.72
KRH23631	Soybean	plasma membrane	84.08	84.62
KRH20096	Soybean	endoplasmic reticulum, mitochondrion	82.2	82.89
KRH56972	Soybean	cytosol, peroxisome, plasma membrane	82.72	82.72
KRH03407	Soybean	endoplasmic reticulum	82.51	82.51
KRH03539	Soybean	endoplasmic reticulum	81.78	82.47
KRH18509	Soybean	endoplasmic reticulum	76.34	82.09
KRH54497	Soybean	endoplasmic reticulum, extracellular, mitochondrion, nucleus	81.99	81.9
KRH63412	Soybean	endoplasmic reticulum	81.99	81.9
KRH12960	Soybean	endoplasmic reticulum	72.67	80.51
KRG93484	Soybean	extracellular	80.21	80.13
KRH16408	Soybean	cytosol, extracellular, plasma membrane	15.71	79.79
KRH66539	Soybean	peroxisome, plasma membrane	76.54	77.6
KRH68997	Soybean	plasma membrane	75.71	77.41
KRH48806	Soybean	endoplasmic reticulum	77.07	76.67
KRH16612	Soybean	peroxisome	22.3	65.74
KRH52592	Soybean	extracellular, plasma membrane	4.29	56.16
KRH16357	Soybean	cytosol	8.17	40.62
KRH43127	Soybean	plasma membrane	18.32	23.27
KRH59277	Soybean	mitochondrion	21.47	21.24

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	EntrezGene:100804422	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
EMBL:ACUP02009288	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil
EnsemblPlantsGene:GLYMA_15G162600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006139	GO:GO:0006754
GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0008553	GO:GO:0009058
GO:GO:0009987	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0046872	GO:GO:0120029	GO:GO:1902600	InterPro:HAD-like_sf	InterPro:HAD_sf	UniProt:I1MGZ2
InterPro:IPR023214	InterPro:IPR023299	EnsemblPlants:KRH12255	ProteinID:KRH12255	ProteinID:KRH12255.1	InterPro:P-type_ATPase_IIIA
PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120	PANTHER:PTHR42861
PANTHER:PTHR42861:SF41	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665
TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix	UniParc:UPI000233C13B	SEG:seg	:

Description

hypothetical protein

Coordinates

chr15:+:13923374..13932194

Molecular Weight (calculated)

105112.0 Da

IEP (calculated)

6.801

GRAVY (calculated)

0.082

Length

955 amino acids

Sequence
(BLAST)

001: MAGDKGTITL EEIKNETVDL ERIPIEEVFE QLKCTREGLS STEGENRLQI FGPNKLEEKK ESKFLKFLGF MWNPLSWVME AAAIMAIALA NGEGKPPDWQ
101: DFVGIVCLLL INSTISFIEE NNAGNAAAAL MAGLAPKTKV LRDGKWSEQE AAILVPGDII SIKLGDIIPA DARLLEGDPL MVDQAALTGE SLPVTKHPGQ
201: EVFSGSTCKQ GEIEAVVIAT GVHTFFGKAA HLVDSTNQVG HFQKVLTAIG NFCICSIAVG MLAEIIVMYP IQHRKYRDGI DNLLVLLIGG IPIAMPTVLS
301: VTMAIGSHKL SQQGAITKRM TAIEEMAGMD VLCSDKTGTL TLNKLTVDKN LVEVFAKGVD KDHVILLAAR AARTENQDAI DAAIVGMLAD PKEARAGIRE
401: VHFLPFNPVD KRTALTYIDA NGNWHRASKG APEQIMALCN LRDDAKKKVH AIIDKFAERG LRSLAVARQE VPEKTKESAG APWQFVGLLS LFDPPRHDSA
501: ETIRRALNLG VNVKMITGDQ LAIAKETGRR LGMGTNMYPS ATLLGQDKDA SIAALPVEEL IEKADGFAGV FPEHKYEIVK KLQERKHICG MTGDGVNDAP
601: ALKKADIGIA VADATDAARS ASDIVLTEPG LSVIISAVLT SRAIFQRMKN YTIYAVSITI RIVFGFMFIA LIWKFDFSPF MVLIIAILND GTIMTISKDR
701: VKPSPLPDSW KLNEIFATGV VLGGYLALMT VIFFWAMKET TFFPDKFGVR PIHDNPDEMT AALYLQVSIV SQALIFVTRS RSWSFIERPG LLLMTAFIIA
801: QLIATVIAVY ANWGFARIQG IGWGWAGVIW LYSIVFYFPL DLMKFAIRYI LSGKAWNNLL ENKTAFTTKK DYGKEEREAQ WALAQRTLHG LQPPETSNIF
901: NEKSSYRELT EIAEQAKRRA EVARLRELHT LKGHVESVVK LKGLDIDTIQ QHYTV

Best Arabidopsis Sequence Match ( AT4G30190.1 )
(BLAST)

001: MSSLEDIKNE TVDLEKIPIE EVFQQLKCSR EGLTTQEGED RIQIFGPNKL EEKKESKLLK FLGFMWNPLS WVMEMAAIMA IALANGDGRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TAIGNFCICS IAIGMVIEII VMYPIQRRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDGSGNWHR VSKGAPEQIL ELAKASNDLS KKVLSIIDKY AERGLRSLAV ARQVVPEKTK ESPGAPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSSALLGT HKDANLASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGVVLGGYQ AIMTVIFFWA AHKTDFFSDT FGVRSIRDNN HELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FLIAQLIATL
801: IAVYANWEFA KIRGIGWGWA GVIWLYSIVT YFPLDVFKFA IRYILSGKAW LNLFENKTAF TMKKDYGKEE REAQWALAQR TLHGLQPKEA VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVVKLKGLDI ETPSHYTV

Arabidopsis Description

HA2Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:F4JPJ7]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.