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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • cytosol 2
  • plastid 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
 nucleus: 21132161
endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 23041469 doi
S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa
National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH56972 Soybean cytosol, peroxisome, plasma membrane 98.74 98.74
KRH63412 Soybean endoplasmic reticulum 95.18 95.08
KRH54497 Soybean endoplasmic reticulum, extracellular, mitochondrion, nucleus 94.87 94.77
VIT_17s0000g05540.t01 Wine grape extracellular 93.82 93.72
AT5G62670.1 Thale cress peroxisome 92.25 92.15
Solyc03g113400.2.1 Tomato nucleus 92.25 92.15
Solyc06g071100.2.1 Tomato nucleus, plastid 92.15 92.05
PGSC0003DMT400083041 Potato cytosol, peroxisome, plasma membrane 92.04 91.95
CDY45757 Canola peroxisome 91.73 91.06
GSMUA_Achr4P22290_001 Banana plasma membrane 89.63 90.77
KRH18509 Soybean endoplasmic reticulum 84.4 90.77
GSMUA_Achr4P22300_001 Banana plasma membrane 90.47 90.47
AT3G47950.1 Thale cress peroxisome 90.89 90.42
Zm00001d041214_P003 Maize plasma membrane 90.05 89.96
EES16456 Sorghum cytosol, peroxisome, plasma membrane 89.95 89.85
GSMUA_Achr9P10970_001 Banana cytosol, peroxisome, plasma membrane 89.63 89.63
Os12t0638700-01 Rice plasma membrane 89.53 89.44
KXG37819 Sorghum peroxisome 89.32 89.41
Os03t0689300-01 Rice plasma membrane 89.42 89.33
Zm00001d033552_P003 Maize peroxisome 89.01 89.1
CDY30730 Canola plasma membrane 73.4 89.07
PGSC0003DMT400065168 Potato cytosol, peroxisome, plasma membrane 92.25 88.99
TraesCS5D01G013100.2 Wheat golgi 89.11 88.83
Zm00001d019062_P005 Maize plasma membrane 82.51 88.74
TraesCS5A01G004200.1 Wheat golgi, unclear 88.9 88.62
Os07t0191200-01 Rice plasma membrane 88.8 88.61
KRG93484 Soybean extracellular 88.38 88.28
TraesCS4A01G283100.2 Wheat nucleus 88.59 88.22
TraesCS4D01G027900.1 Wheat peroxisome 88.17 87.98
HORVU4Hr1G004820.7 Barley peroxisome 88.59 87.94
EER96010 Sorghum cytosol, peroxisome, plasma membrane 87.96 87.87
TraesCS5A01G004300.2 Wheat cytosol, peroxisome, plasma membrane 87.02 87.02
Zm00001d021000_P008 Maize cytosol, peroxisome, plasma membrane 42.09 85.9
TraesCSU01G073200.3 Wheat plasma membrane 88.9 85.76
TraesCS4A01G282900.1 Wheat plasma membrane 76.75 85.23
HORVU5Hr1G000780.15 Barley golgi, mitochondrion, plasma membrane 87.23 83.8
TraesCS4B01G031000.1 Wheat plasma membrane 80.42 83.3
KRH12255 Soybean endoplasmic reticulum 82.51 82.51
KRH04967 Soybean plasma membrane 82.09 82.44
KRH02845 Soybean endoplasmic reticulum 81.99 82.16
KRH16128 Soybean endoplasmic reticulum, mitochondrion, nucleus 81.68 82.02
KRH19045 Soybean endoplasmic reticulum 81.15 81.66
Zm00001d007775_P001 Maize peroxisome 56.44 81.42
KRH52590 Soybean cytosol, peroxisome, plasma membrane 80.52 80.86
KRH66539 Soybean peroxisome, plasma membrane 79.69 80.79
KRH61927 Soybean endoplasmic reticulum, mitochondrion 80.42 80.76
KRH47385 Soybean endoplasmic reticulum 79.69 80.19
KRH48806 Soybean endoplasmic reticulum 80.42 80.0
KRH23631 Soybean plasma membrane 79.48 79.98
KRH09668 Soybean endoplasmic reticulum 79.48 79.98
KRH44521 Soybean endoplasmic reticulum 78.85 79.35
KRH20096 Soybean endoplasmic reticulum, mitochondrion 77.17 77.82
KRH03539 Soybean endoplasmic reticulum 76.96 77.61
KRH37283 Soybean plasma membrane 82.51 77.48
KRH12960 Soybean endoplasmic reticulum 69.63 77.15
KRH68997 Soybean plasma membrane 74.87 76.55
KRH16408 Soybean cytosol, extracellular, plasma membrane 14.97 76.06
Bra029249.1-P Field mustard plastid 91.73 74.68
KRH16612 Soybean peroxisome 16.65 49.07
KRH52592 Soybean extracellular, plasma membrane 3.35 43.84
KRH16357 Soybean cytosol 7.85 39.06
KRH43127 Soybean plasma membrane 18.85 23.94
KRH59277 Soybean mitochondrion 21.78 21.55
Protein Annotations
KEGG:00190+3.6.3.6Gene3D:1.20.1110.10EntrezGene:100802859MapMan:24.1.2.3.1Gene3D:3.40.1110.10Gene3D:3.40.50.1000
EMBL:ACUP02010348InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sf
ncoils:CoilEnsemblPlantsGene:GLYMA_17G096100GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215
GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006139
GO:GO:0006754GO:GO:0006810GO:GO:0006811GO:GO:0008150GO:GO:0008152GO:GO:0008553
GO:GO:0009058GO:GO:0009987GO:GO:0015992GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0016887GO:GO:0046872GO:GO:0120029GO:GO:1902600InterPro:HAD-like_sfInterPro:HAD_sf
UniProt:I1MTP0InterPro:IPR023214InterPro:IPR023299EnsemblPlants:KRH03407ProteinID:KRH03407ProteinID:KRH03407.1
InterPro:P-type_ATPase_IIIAPFAM:PF00122PFAM:PF00690PFAM:PF00702PRINTS:PR00119PRINTS:PR00120
ScanProsite:PS00154PANTHER:PTHR42861PANTHER:PTHR42861:SF5InterPro:P_typ_ATPaseSMART:SM00831SUPFAM:SSF56784
SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR01494TIGRFAMs:TIGR01647TMHMM:TMhelixUniParc:UPI000233F378
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr17:+:7545395..7552064
Molecular Weight (calculated)
105091.0 Da
IEP (calculated)
6.705
GRAVY (calculated)
0.107
Length
955 amino acids
Sequence
(BLAST)
001: MGDKSQVLEA VLKETVDLEN IPIEEVLENL RCGREGLSSE AAEERLTIFG HNKLEEKKES KFLKFLGFMW NPLSWVMEAA AIMAIALANG GGKAPDWQDF
101: VGIITLLLIN STISFIEENN AGNAAAALMA RLAPKAKVLR DGRWNEQDAA VLVPGDIISI KLGDIIPADA RLLEGDPLKI DQSALTGESL PVTKGPGDGV
201: YSGSTCKQGE IEAVVIATGV HTFFGKAAHL VDTTNQVGHF QKVLTAIGNF CICSIALGMV IEIIVMYPIQ DRPYRSGIDN LLVLLIGGIP IAMPTVLSVT
301: MAIGSHRLAQ QGAITKRMTA IEEMAGMDVL CSDKTGTLTL NKLTVDKNLV EVFAKGVDPD TVILMAARAS RLENQDAIDT AIVGMLADPK EARAGIQEVH
401: FLPFNPTDKR TALTYLDQDG KMHRVSKGAP EQILNLAHNK ADIERRVHSV IDKFAERGLR SLAVAYQEVP DGRKESAGGP WQFIGLLSLF DPPRHDSAET
501: IRRALNLGVN VKMITGDQLA IGKETGRRLG MGTNMYPSSA LLGQDKDESI VALPIDELIE KADGFAGVFP EHKYEIVKRL QARKHICGMT GDGVNDAPAL
601: KKADIGIAVA DATDAARSAS DIVLTEPGLS VIISAVLTSR AIFQRMKNYT IYAVSITIRI VLGFMLLALI WKFDFPPFMV LIIAILNDGT IMTISKDRVK
701: PSPLPDSWKL AEIFTTGVVL GSYLAMMTVI FFWAAYKTNF FPRVFGVPTL EKTAHDDYRK LASAIYLQVS TISQALIFVT RSRGWSYVER PGLLLVFAFI
801: VAQLIATLIA VYGNWSFCSI EGIGWGWAGV IWLYNIIFYI PLDIIKFLIR YALSGRAWDL VIEQRIAFTR QKDFGKEQRE LQWAHAQRTL HGLQPADTKF
901: NERTHVNELN QMAEEAKRRA EIARLRELHT LKGHVESVVR LKGLDIDTIQ QAYTV
Best Arabidopsis Sequence Match ( AT5G62670.1 )
(BLAST)
001: MGDKEEVLEA VLKETVDLEN VPIEEVFESL RCSREGLTTE AADERLALFG HNKLEEKKES KFLKFLGFMW NPLSWVMEAA AIMAIALANG GGKPPDWQDF
101: VGIITLLVIN STISFIEENN AGNAAAALMA RLAPKAKVLR DGRWGEQDAA ILVPGDIISI KLGDIVPADA RLLEGDPLKI DQSSLTGESL PVTKGPGDGV
201: YSGSTCKQGE LEAVVIATGV HTFFGKAAHL VDTTNHVGHF QQVLTAIGNF CICSIAVGMI IEIVVMYPIQ HRAYRPGIDN LLVLLIGGIP IAMPTVLSVT
301: MAIGSHRLSQ QGAITKRMTA IEEMAGMDVL CSDKTGTLTL NKLTVDKNLI EVFTKGVDAD TVVLMAAQAS RLENQDAIDA AIVGMLADPK EARAGVREVH
401: FLPFNPTDKR TALTYIDSDG KMHRVSKGAP EQILNLAHNR AEIERRVHAV IDKFAERGLR SLAVAYQEVP EGTKESAGGP WQFMGLMPLF DPPRHDSAET
501: IRRALNLGVN VKMITGDQLA IGKETGRRLG MGTNMYPSSA LLGQHKDESI GALPIDDLIE KADGFAGVFP EHKYEIVKRL QARKHICGMT GDGVNDAPAL
601: KKADIGIAVA DATDAARSAS DIVLTEPGLS VIISAVLTSR AIFQRMKNYT IYAVSITIRI VLGFMLLALI WKFDFPPFMV LIIAILNDGT IMTISKDRVK
701: PSPLPDSWKL SEIFATGVVF GSYMAMMTVI FFWAAYKTDF FPRTFGVSTL EKTAHDDFRK LASAIYLQVS IISQALIFVT RSRSWSYVER PGMLLVVAFI
801: LAQLVATLIA VYANWSFAAI EGIGWGWAGV IWLYNIVFYI PLDIIKFLIR YALSGRAWDL VIEQRVAFTR QKDFGKEQRE LQWAHAQRTL HGLQAPDAKM
901: FPERTHFNEL SQMAEEAKRR AEIARLRELH TLKGHVESVV RLKGLDIETI QQAYTV
Arabidopsis Description
AHA11ATPase 11, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LV11]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.