Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26228564
|
msms PMID:
26228564
doi
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G027900.1 | Wheat | peroxisome | 98.02 | 98.22 |
| HORVU4Hr1G004820.7 | Barley | peroxisome | 98.23 | 97.92 |
| KXG37819 | Sorghum | peroxisome | 93.33 | 93.82 |
| Zm00001d033552_P003 | Maize | peroxisome | 92.91 | 93.4 |
| Os03t0689300-01 | Rice | plasma membrane | 92.81 | 93.1 |
| TraesCS4A01G282900.1 | Wheat | plasma membrane | 82.79 | 92.33 |
| TraesCS5A01G004200.1 | Wheat | golgi, unclear | 91.45 | 91.54 |
| TraesCS5A01G004300.2 | Wheat | cytosol, peroxisome, plasma membrane | 89.68 | 90.05 |
| GSMUA_Achr9P10970_001 | Banana | cytosol, peroxisome, plasma membrane | 89.68 | 90.05 |
| GSMUA_Achr4P22290_001 | Banana | plasma membrane | 88.53 | 90.03 |
| Solyc03g113400.2.1 | Tomato | nucleus | 89.36 | 89.64 |
| VIT_17s0000g05540.t01 | Wine grape | extracellular | 89.16 | 89.44 |
| GSMUA_Achr4P22300_001 | Banana | plasma membrane | 88.84 | 89.21 |
| Solyc06g071100.2.1 | Tomato | nucleus, plastid | 88.63 | 88.91 |
| PGSC0003DMT400083041 | Potato | cytosol, peroxisome, plasma membrane | 88.53 | 88.81 |
| KRH63412 | Soybean | endoplasmic reticulum | 88.32 | 88.6 |
| KRH54497 | Soybean | endoplasmic reticulum, extracellular, mitochondrion, nucleus | 88.32 | 88.6 |
| KRH03407 | Soybean | endoplasmic reticulum | 88.22 | 88.59 |
| KRH18509 | Soybean | endoplasmic reticulum | 81.86 | 88.4 |
| KRH56972 | Soybean | cytosol, peroxisome, plasma membrane | 88.01 | 88.38 |
| VIT_14s0066g02550.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 87.49 | 87.85 |
| CDY45757 | Canola | peroxisome | 87.9 | 87.63 |
| AT5G62670.1 | Thale cress | peroxisome | 87.28 | 87.55 |
| PGSC0003DMT400065168 | Potato | cytosol, peroxisome, plasma membrane | 89.36 | 86.57 |
| AT3G47950.1 | Thale cress | peroxisome | 86.65 | 86.56 |
| CDY30730 | Canola | plasma membrane | 71.01 | 86.53 |
| KRG93484 | Soybean | extracellular | 86.03 | 86.3 |
| TraesCS2A01G502400.1 | Wheat | golgi | 79.35 | 80.02 |
| TraesCS6A01G360500.1 | Wheat | peroxisome | 76.54 | 77.51 |
| TraesCS7A01G145400.1 | Wheat | peroxisome | 75.81 | 76.85 |
| TraesCS7A01G510800.1 | Wheat | plasma membrane | 76.02 | 76.82 |
| TraesCS1A01G258300.1 | Wheat | peroxisome | 76.64 | 76.8 |
| TraesCS5A01G543300.1 | Wheat | peroxisome | 77.48 | 76.21 |
| Bra029249.1-P | Field mustard | plastid | 88.01 | 71.95 |
| TraesCS4A01G005000.2 | Wheat | unclear | 66.94 | 68.81 |
| Solyc02g088060.1.1 | Tomato | cytosol | 16.48 | 52.32 |
| PGSC0003DMT400003602 | Potato | peroxisome | 49.43 | 51.97 |
| TraesCS4A01G247800.1 | Wheat | plastid | 11.05 | 32.72 |
Protein Annotations
| KEGG:00190+3.6.3.6 | Gene3D:1.20.1110.10 | MapMan:24.1.2.3.1 | Gene3D:3.40.1110.10 | Gene3D:3.40.50.1000 | InterPro:ATPase_P-typ_P_site |
| InterPro:ATPase_P-typ_TM_dom_sf | InterPro:ATPase_P-typ_cation-transptr_N | InterPro:ATPase_P-typ_cyto_dom_N | InterPro:ATPase_P-typ_transduc_dom_A_sf | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0008553 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0120029 |
| InterPro:HAD-like_sf | InterPro:HAD_sf | InterPro:IPR023214 | InterPro:IPR023299 | InterPro:P-type_ATPase_IIIA | PFAM:PF00122 |
| PFAM:PF00690 | PFAM:PF00702 | PRINTS:PR00119 | PRINTS:PR00120 | ScanProsite:PS00154 | PANTHER:PTHR42861 |
| PANTHER:PTHR42861:SF5 | InterPro:P_typ_ATPase | SMART:SM00831 | SUPFAM:SSF56784 | SUPFAM:SSF81653 | SUPFAM:SSF81665 |
| TIGRFAMs:TIGR01494 | TIGRFAMs:TIGR01647 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS4A01G283100 | EnsemblPlants:TraesCS4A01G283100.2 | TIGR:cd02076 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4A:-:590180868..590186819
Molecular Weight (calculated)
105488.0 Da
IEP (calculated)
6.686
GRAVY (calculated)
0.113
Length
959 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMASRQEGS LDAVLKEAVD LEHIPIDEVF ENLRCSHEGL TSEQAQQRLQ IFGPNKLEEK EESKFLKFLG FMWNPLSWVM EAAAIMAIAL ANGGGKPPDW
101: QDFVGIITLL LINSTISFIE ENNAGNAAAA LMARLAPKAK VLRDGRWTEE EAAVLVPGDI ISIKLGDIIP ADARLLDGDP LKIDQSALTG ESLPATKGLG
201: DGVYSGSTVK QGEIEAVVIA TGVHTFFGKA AHLVDSTNQV GHFQQVLTAI GNFCICSIAV GMFIEIIVMY PIQHRAYRPG IDNLLVLLIG GIPIAMPTVL
301: SVTMAIGSHR LSQQGAITKR MTAIEEMAGM DVLCSDKTGT LTLNKLSVDK NLIEVFEKGV TQDQVILMAA RASRIENQDA IDTAIVGMLG DPKEARAGIQ
401: EVHFLPFNPT DKRTALTYID GDGKMCRVSK GAPEQILNLA HNKSEIAQKV HTVIDKFAER GLRSLGVAYQ DVPDGRKESP GSPWHFVALL PLFDPPRHDS
501: AETIQRALNL GVNVKMITGD QLAIGKETGR RLGMGTNMYP SSALLGQNKD ESIADLPVDD LIEKADGFAG VFPEHKYEIV KRLQARKHIC GMTGDGVNDA
601: PALKKADIGI AVADATDAAR SASDIVLTEP GLSVIISAVL TSRAIFQRMK NYTIYAVSIT IRIVLGFMLL ALIWEFDFPP FMVLIIAILN DGTIMTISKD
701: RVKPSPLPDS WKLAEIFTTG VVLGGYLAMM TVIFFWAAYK TNFFPRVFHV KSLEKTTQDD FKMLASAVYL QVSTISQALI FVTRSRSWSF VERPGFLLVF
801: AFFVAQLIAT LIAVYADWGF TSIKGIGWGW AGIVWLYNIV FYFPLDIIKF FIRYALSGKA WDLVIDQRIA FTRKKHFGKE ERELKWAHAQ RTLHGLQPPD
901: AKLFPEKAAY NELSQMAEEA KRRAEIARLR ELHTLKGHVE SVVKLKGLDI GTIQQSYTV
101: QDFVGIITLL LINSTISFIE ENNAGNAAAA LMARLAPKAK VLRDGRWTEE EAAVLVPGDI ISIKLGDIIP ADARLLDGDP LKIDQSALTG ESLPATKGLG
201: DGVYSGSTVK QGEIEAVVIA TGVHTFFGKA AHLVDSTNQV GHFQQVLTAI GNFCICSIAV GMFIEIIVMY PIQHRAYRPG IDNLLVLLIG GIPIAMPTVL
301: SVTMAIGSHR LSQQGAITKR MTAIEEMAGM DVLCSDKTGT LTLNKLSVDK NLIEVFEKGV TQDQVILMAA RASRIENQDA IDTAIVGMLG DPKEARAGIQ
401: EVHFLPFNPT DKRTALTYID GDGKMCRVSK GAPEQILNLA HNKSEIAQKV HTVIDKFAER GLRSLGVAYQ DVPDGRKESP GSPWHFVALL PLFDPPRHDS
501: AETIQRALNL GVNVKMITGD QLAIGKETGR RLGMGTNMYP SSALLGQNKD ESIADLPVDD LIEKADGFAG VFPEHKYEIV KRLQARKHIC GMTGDGVNDA
601: PALKKADIGI AVADATDAAR SASDIVLTEP GLSVIISAVL TSRAIFQRMK NYTIYAVSIT IRIVLGFMLL ALIWEFDFPP FMVLIIAILN DGTIMTISKD
701: RVKPSPLPDS WKLAEIFTTG VVLGGYLAMM TVIFFWAAYK TNFFPRVFHV KSLEKTTQDD FKMLASAVYL QVSTISQALI FVTRSRSWSF VERPGFLLVF
801: AFFVAQLIAT LIAVYADWGF TSIKGIGWGW AGIVWLYNIV FYFPLDIIKF FIRYALSGKA WDLVIDQRIA FTRKKHFGKE ERELKWAHAQ RTLHGLQPPD
901: AKLFPEKAAY NELSQMAEEA KRRAEIARLR ELHTLKGHVE SVVKLKGLDI GTIQQSYTV
001: MTTTVEDNRE VLEAVLKEAV DLENVPIEEV FENLRCSKEG LTTQAADERL ALFGHNKLEE KKESKFLKFL GFMWNPLSWV MEAAAIMAIA LANGGGKPPD
101: WQDFVGIITL LVINSTISFI EENNAGNAAA ALMARLAPKA KVLRDGRWGE QDAAILVPGD IISIKLGDIV PADARLLEGD PLKIDQSALT GESLPVTKSS
201: GDGVYSGSTC KQGEIEAVVI ATGVHTFFGK AAHLVDTTNQ IGHFQQVLTA IGNFCICSIA VGMLIEIVVM YPIQHRAYRP GIDNLLVLLI GGIPIAMPTV
301: LSVTMAIGSH RLSQQGAITK RMTAIEEMAG MDVLCSDKTG TLTLNKLTVD KNLIEVFMKG VDADTVVLMA ARASRLENQD AIDAAIVGML ADPKDARAGI
401: QEVHFLPFNP TDKRTALTYI DNEGNTHRVS KGAPEQILNL AHNKSEIERR VHAVIDKFAE RGLRSLAVAY QDVPEGRKDS AGGPWQFVGL MPLFDPPRHD
501: SAETIRRALN LGVSVKMITG DQLAIGKETG RRLGMGTNMY PSSALLGQNK DESIVALPVD ELIEKADGFA GVFPEHKYEI VKRLQARKHI CGMTGDGVND
601: APALKKADIG IAVADATDAA RSASDIVLTE PGLSVIISAV LTSRAIFQRM KNYTIYAVSI TIRIVLGFML LALIWQFDFP PFMVLIIAIL NDGTIMTISK
701: DRVKPSPLPD SWKLSEIFAT GVVFGSYMAM MTVIFFWVSY KTDFFPRTFG VATLEKTAHD DFRKLASAIY LQVSIISQAL IFVTRSRSWS FVERPGIFLM
801: IAFILAQLVA TLIAVYANWS FAAIEGIGWG WAGVIWLYNI IFYIPLDFIK FFIRYALSGR AWDLVIEQRV AFTRQKDFGK EQRELQWAHA QRTLHGLQAP
901: DTKMFTDRTH VSELNQMAEE AKRRAEIARL RELHTLKGHV ESVVRLKGLD IETIQQAYTV
101: WQDFVGIITL LVINSTISFI EENNAGNAAA ALMARLAPKA KVLRDGRWGE QDAAILVPGD IISIKLGDIV PADARLLEGD PLKIDQSALT GESLPVTKSS
201: GDGVYSGSTC KQGEIEAVVI ATGVHTFFGK AAHLVDTTNQ IGHFQQVLTA IGNFCICSIA VGMLIEIVVM YPIQHRAYRP GIDNLLVLLI GGIPIAMPTV
301: LSVTMAIGSH RLSQQGAITK RMTAIEEMAG MDVLCSDKTG TLTLNKLTVD KNLIEVFMKG VDADTVVLMA ARASRLENQD AIDAAIVGML ADPKDARAGI
401: QEVHFLPFNP TDKRTALTYI DNEGNTHRVS KGAPEQILNL AHNKSEIERR VHAVIDKFAE RGLRSLAVAY QDVPEGRKDS AGGPWQFVGL MPLFDPPRHD
501: SAETIRRALN LGVSVKMITG DQLAIGKETG RRLGMGTNMY PSSALLGQNK DESIVALPVD ELIEKADGFA GVFPEHKYEI VKRLQARKHI CGMTGDGVND
601: APALKKADIG IAVADATDAA RSASDIVLTE PGLSVIISAV LTSRAIFQRM KNYTIYAVSI TIRIVLGFML LALIWQFDFP PFMVLIIAIL NDGTIMTISK
701: DRVKPSPLPD SWKLSEIFAT GVVFGSYMAM MTVIFFWVSY KTDFFPRTFG VATLEKTAHD DFRKLASAIY LQVSIISQAL IFVTRSRSWS FVERPGIFLM
801: IAFILAQLVA TLIAVYANWS FAAIEGIGWG WAGVIWLYNI IFYIPLDFIK FFIRYALSGR AWDLVIEQRV AFTRQKDFGK EQRELQWAHA QRTLHGLQAP
901: DTKMFTDRTH VSELNQMAEE AKRRAEIARL RELHTLKGHV ESVVRLKGLD IETIQQAYTV
Arabidopsis Description
AHA4Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VFQ4]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.