Factsheet for TraesCS4A01G005000.2

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	unclear
Any Predictor:	nucleus, peroxisome, plasma membrane
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G300000.1	Wheat	plasma membrane	94.75	93.25
HORVU4Hr1G077430.3	Barley	peroxisome	91.96	91.67
TraesCS4D01G298900.3	Wheat	nucleus, peroxisome, plasma membrane	95.39	90.91
KXG40033	Sorghum	peroxisome	83.17	81.0
Os03t0183900-01	Rice	peroxisome	44.16	76.58
VIT_09s0002g00130.t01	Wine grape	plasma membrane	77.6	76.05
KRH68997	Soybean	plasma membrane	75.88	75.8
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	77.28	74.56
AT1G17260.1	Thale cress	peroxisome	73.31	72.23
Bra016610.1-P	Field mustard	plasma membrane	72.88	72.03
CDX96779	Canola	plasma membrane	72.56	71.72
CDX83917	Canola	plasma membrane	72.13	71.29
TraesCS7A01G510800.1	Wheat	plasma membrane	68.38	67.23
TraesCS2A01G502400.1	Wheat	golgi	68.38	67.09
TraesCS4A01G283100.2	Wheat	nucleus	68.81	66.94
TraesCS5A01G004200.1	Wheat	golgi, unclear	68.7	66.91
TraesCS4A01G282900.1	Wheat	plasma membrane	61.63	66.86
TraesCS5A01G004300.2	Wheat	cytosol, peroxisome, plasma membrane	68.06	66.49
TraesCS1A01G258300.1	Wheat	peroxisome	67.1	65.41
TraesCS6A01G360500.1	Wheat	peroxisome	66.24	65.26
TraesCS7A01G145400.1	Wheat	peroxisome	66.13	65.22
TraesCS5A01G543300.1	Wheat	peroxisome	67.31	64.41
TraesCS4A01G247800.1	Wheat	plastid	11.25	32.41

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000003	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0007033	GO:GO:0007035
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008553	GO:GO:0009058	GO:GO:0009506
GO:GO:0009507	GO:GO:0009536	GO:GO:0009705	GO:GO:0009791	GO:GO:0009987	GO:GO:0010023
GO:GO:0010214	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0019725
GO:GO:0019748	GO:GO:0120029	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299
InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF20	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G005000
EnsemblPlants:TraesCS4A01G005000.2	TIGR:cd02076	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:3142557..3147317

Molecular Weight (calculated)

100831.0 Da

IEP (calculated)

6.166

GRAVY (calculated)

0.194

Length

933 amino acids

Sequence
(BLAST)

001: MDDDGLGKPL LGRESLSTQD IDLGNLPLEE VFEQLSTSRC GLSSADAAER LQLFGANRLE EKRENKVLKF ISFMWNPLSW VMEAAAVMAL VLANGGSQGP
101: DWEDFVGIVC LLIINSTISF VEENNAGNAA ASLMAHLAPR TKVLRDGQWQ ELDASVLVPG DIISIRLGDI VPADARLLEG DPLKIDQSAL TGESLPVTKR
201: TGDLVFTGST CKHGEIEAVV IATGTHSFFG KAAHLVDTTE VVGHFQKVLT CIGNFCICSI AVGVIVEVII MFAVQHRSYR EGINNVLVLL IGGIPIAMPT
301: VLSVTLAIGS HRLSQQGAIT KRMTAIEEMA GMDVLCCDKT GTLTLNHLTV DKNLIEVFSG GMDRDMIILL AARASRVDNQ DAIDMAIINM LSDPKEARAN
401: ITEVHFLPFN PVDKRTAITY IDSGGNWSRV SKGAPEQILN LCFNKDDIAE KAQRVVDSFA ERGLRSLAVA YQEVPERSRH GDGGPWVFCG VLPLFDPPRH
501: DSADTIRRAL DLGVCVKMIT GDHLAIAKET GRRLGTGTNM HPSAALFGSR GGGDEGAAMP VEELVEGADG FAGVFPEHKH EIVRLLQANG HVCGMTGDGV
601: NDAPALKKAD IGIAVSEATD AARAAADIVL TEPGLGVIVC AVLTSRAIFQ RMKNYTIYAV CITIRIVVGF VLLASIWEYD FPPFMVLVIA ILNDGTIMAI
701: SKDRVTPSWS PDSWKLKEIF ATGVVIGAYL ALATVLFYWA VTRTTFFESH FGVRSLKLDA EEVSSAVYLQ VSITSQALIF VTRSRGLSFL DRPGALLVGA
801: FAVAQLVATL VAVYAAAGFA SISGVGWRWA GVIWLYSLAS YLPLDPIKVA VRYALSGEAW GLLLDRKEEE RLLRQRRGGS LSDHLLSSRT PRSAVAAQAR
901: RRAEIARLGE THAPRAHVDS VMRLKRDRSA HSV

Best Arabidopsis Sequence Match ( AT1G17260.1 )
(BLAST)

001: MAEDLDKPLL DPDTFNRKGI DLGILPLEEV FEYLRTSPQG LLSGDAEERL KIFGPNRLEE KQENRFVKFL GFMWNPLSWV MEAAALMAIA LANSQSLGPD
101: WEDFTGIVCL LLINATISFF EENNAGNAAA ALMARLALKT RVLRDGQWQE QDASILVPGD IISIKLGDII PADARLLEGD PLKIDQSVLT GESLPVTKKK
201: GEQVFSGSTC KQGEIEAVVI ATGSTTFFGK TARLVDSTDV TGHFQQVLTS IGNFCICSIA VGMVLEIIIM FPVQHRSYRI GINNLLVLLI GGIPIAMPTV
301: LSVTLAIGSH RLSQQGAITK RMTAIEEMAG MDVLCCDKTG TLTLNSLTVD KNLIEVFVDY MDKDTILLLA GRASRLENQD AIDAAIVSML ADPREARANI
401: REIHFLPFNP VDKRTAITYI DSDGKWYRAT KGAPEQVLNL CQQKNEIAQR VYAIIDRFAE KGLRSLAVAY QEIPEKSNNS PGGPWRFCGL LPLFDPPRHD
501: SGETILRALS LGVCVKMITG DQLAIAKETG RRLGMGTNMY PSSSLLGHNN DEHEAIPVDE LIEMADGFAG VFPEHKYEIV KILQEMKHVV GMTGDGVNDA
601: PALKKADIGI AVADATDAAR SSADIVLTDP GLSVIISAVL TSRAIFQRMR NYTVYAVSIT IRIVLGFTLL ALIWEYDFPP FMVLIIAILN DGTIMTISKD
701: RVRPSPTPES WKLNQIFATG IVIGTYLALV TVLFYWIIVS TTFFEKHFHV KSIANNSEQV SSAMYLQVSI ISQALIFVTR SRGWSFFERP GTLLIFAFIL
801: AQLAATLIAV YANISFAKIT GIGWRWAGVI WLYSLIFYIP LDVIKFVFHY ALSGEAWNLV LDRKTAFTYK KDYGKDDGSP NVTISQRSRS AEELRGSRSR
901: ASWIAEQTRR RAEIARLLEV HSVSRHLESV IKLKQIDQRM IRAAHTV

Arabidopsis Description

AHA10Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178W776]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.