Factsheet for TraesCS4D01G298900.3

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, plasma membrane

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G300000.1	Wheat	plasma membrane	93.46	96.52
TraesCS4A01G005000.2	Wheat	unclear	90.91	95.39
HORVU4Hr1G077430.3	Barley	peroxisome	89.79	93.91
KXG40033	Sorghum	peroxisome	79.88	81.63
Os03t0183900-01	Rice	peroxisome	43.41	79.0
VIT_09s0002g00130.t01	Wine grape	plasma membrane	74.87	77.0
KRH68997	Soybean	plasma membrane	73.24	76.77
GSMUA_AchrUn_...	Banana	cytosol, peroxisome, plasma membrane	74.26	75.18
AT1G17260.1	Thale cress	peroxisome	71.3	73.71
Bra016610.1-P	Field mustard	plasma membrane	70.28	72.88
CDX96779	Canola	plasma membrane	70.07	72.67
CDX83917	Canola	plasma membrane	69.66	72.25
TraesCS2D01G503000.1	Wheat	golgi, plastid, unclear	66.6	68.56
TraesCS4D01G027900.1	Wheat	peroxisome	66.39	67.92
TraesCS5D01G013100.2	Wheat	golgi	66.39	67.85
TraesCS7D01G500200.1	Wheat	peroxisome	65.47	67.54
TraesCS6D01G344000.1	Wheat	peroxisome	63.84	65.79
TraesCS7D01G146700.1	Wheat	peroxisome	63.53	65.75
TraesCS1D01G257600.1	Wheat	peroxisome	64.15	65.62

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	Gene3D:2.60.120.1500	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	GO:GO:0000003
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0007033
GO:GO:0007035	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008553	GO:GO:0009058
GO:GO:0009506	GO:GO:0009507	GO:GO:0009536	GO:GO:0009705	GO:GO:0009791	GO:GO:0009987
GO:GO:0010023	GO:GO:0010214	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787
GO:GO:0019725	GO:GO:0019748	GO:GO:0120029	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214
InterPro:IPR023299	InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF20	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS4D01G298900	EnsemblPlants:TraesCS4D01G298900.3	TIGR:cd02076	SEG:seg	:	:

Description

No Description!

Coordinates

chr4D:-:468212550..468217049

Molecular Weight (calculated)

106180.0 Da

IEP (calculated)

6.593

GRAVY (calculated)

0.193

Length

979 amino acids

Sequence
(BLAST)

001: MDDDGLGKPL LGRESLSTQD IDLGNLPLEE VFEQLSTSRC GLSSADAAER LQLFGANRLE EKRENKVLKF ISFMWNPLSW VMEAAAVMAL VLANGGSQGP
101: DWEDFVGIVC LLIINSTISF IEENNAGNAA ASLMARLAPR TKVLRDGQWQ EMDASVLVPG DIISIRLGDI VPADARLLEG DPLKIDQSAL TGESLPVTKR
201: TGDLVFTGST CKHGEIEAVV IATGIRSFFG KAAHLVDSTE VVGHFQKVLT CIGNFCICSI AVGVIVEVII MFAVQHRSYR EGINNVLVLL IGGIPIAMPT
301: VLSVTLAIGS HRLSQQGAIT KRMTAIEEMA GMDVLCCDKT GTLTLNHLTV DKNLVEVFSG GMDRDMIILL AARASRVDNQ DAIDMAIINM LSDPKEARAN
401: ITEVHFLPFN PVDKRTAITY IDSGGNWFRV SKGAPEQILN LCFNKDDIAE KAQRVVDSFA ERGLRSLAVA YQEVPERSRH GDGGPWVFCG VLPLFDPPRH
501: DSADTIRRAL DLGVCVKMIT GDHLAIAKET GRRLGTGTNM HPSAALFGRR GGDEGAAAAV EELVESADGF AGVFPEHKHE IVRLLQASGH VCGMTGDGVN
601: DAPALKKADI GIAVSDATDA ARAAADIVLT EPGLGVIVCA VLTSRAIFQR MRNYTVRLGP PCHAIASTTN VQFGYWDLLV MISTLPMQIY AVCITIRIVV
701: GFVLLASIWE YDFPPFMVLI IAILNDGTIM AISKDRVKPS GSPDSWKLNE IFATGVVIGT YLALVTVLFY WALTRTTFFE SHFGVRSLKG DAEEVSSAVY
801: LQVSITSQAL IFVTRSRGLS FLDRPGTLLV CAFAVAQLVA TLVAVYAAVG FASISGVGWR WAGVIWLYSL VSYLPLDPVK VAVRYALSGE AWSLLLDRKA
901: AFARRRRDYY GEEERRGAAL SARRALSDHL LSSRTPRSAV AEQARRRAEI ASRLGETHSP RAHLESVMKL KRARSAHSV

Best Arabidopsis Sequence Match ( AT1G17260.1 )
(BLAST)

001: MAEDLDKPLL DPDTFNRKGI DLGILPLEEV FEYLRTSPQG LLSGDAEERL KIFGPNRLEE KQENRFVKFL GFMWNPLSWV MEAAALMAIA LANSQSLGPD
101: WEDFTGIVCL LLINATISFF EENNAGNAAA ALMARLALKT RVLRDGQWQE QDASILVPGD IISIKLGDII PADARLLEGD PLKIDQSVLT GESLPVTKKK
201: GEQVFSGSTC KQGEIEAVVI ATGSTTFFGK TARLVDSTDV TGHFQQVLTS IGNFCICSIA VGMVLEIIIM FPVQHRSYRI GINNLLVLLI GGIPIAMPTV
301: LSVTLAIGSH RLSQQGAITK RMTAIEEMAG MDVLCCDKTG TLTLNSLTVD KNLIEVFVDY MDKDTILLLA GRASRLENQD AIDAAIVSML ADPREARANI
401: REIHFLPFNP VDKRTAITYI DSDGKWYRAT KGAPEQVLNL CQQKNEIAQR VYAIIDRFAE KGLRSLAVAY QEIPEKSNNS PGGPWRFCGL LPLFDPPRHD
501: SGETILRALS LGVCVKMITG DQLAIAKETG RRLGMGTNMY PSSSLLGHNN DEHEAIPVDE LIEMADGFAG VFPEHKYEIV KILQEMKHVV GMTGDGVNDA
601: PALKKADIGI AVADATDAAR SSADIVLTDP GLSVIISAVL TSRAIFQRMR NYTVYAVSIT IRIVLGFTLL ALIWEYDFPP FMVLIIAILN DGTIMTISKD
701: RVRPSPTPES WKLNQIFATG IVIGTYLALV TVLFYWIIVS TTFFEKHFHV KSIANNSEQV SSAMYLQVSI ISQALIFVTR SRGWSFFERP GTLLIFAFIL
801: AQLAATLIAV YANISFAKIT GIGWRWAGVI WLYSLIFYIP LDVIKFVFHY ALSGEAWNLV LDRKTAFTYK KDYGKDDGSP NVTISQRSRS AEELRGSRSR
901: ASWIAEQTRR RAEIARLLEV HSVSRHLESV IKLKQIDQRM IRAAHTV

Arabidopsis Description

AHA10Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178W776]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.