Factsheet for TraesCS5D01G013100.2

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

peroxisome 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

golgi: 23128297
golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms, gfp PMID: 23128297 doi

M Suliman, AL Chateigner-Boutin, M Francin-Allami, A Partier, B Bouchet, J Salse, C Pont, J Marion, H Rogniaux, D Tessier, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G004200.1	Wheat	golgi, unclear	99.37	99.37
TraesCS5A01G004300.2	Wheat	cytosol, peroxisome, plasma membrane	96.97	97.28
TraesCSU01G073200.3	Wheat	plasma membrane	99.27	96.06
Os12t0638700-01	Rice	plasma membrane	94.89	95.08
EES16456	Sorghum	cytosol, peroxisome, plasma membrane	94.89	95.08
Zm00001d041214_P003	Maize	plasma membrane	94.68	94.87
HORVU5Hr1G000780.15	Barley	golgi, mitochondrion, plasma membrane	95.51	92.05
TraesCS4D01G027900.1	Wheat	peroxisome	91.75	91.85
GSMUA_Achr9P10970_001	Banana	cytosol, peroxisome, plasma membrane	91.02	91.31
GSMUA_Achr4P22290_001	Banana	plasma membrane	89.67	91.09
GSMUA_Achr4P22300_001	Banana	plasma membrane	90.5	90.79
Solyc03g113400.2.1	Tomato	nucleus	89.67	89.85
VIT_17s0000g05540.t01	Wine grape	extracellular	89.46	89.64
KRH56972	Soybean	cytosol, peroxisome, plasma membrane	88.94	89.21
Solyc06g071100.2.1	Tomato	nucleus, plastid	88.94	89.12
KRH03407	Soybean	endoplasmic reticulum	88.83	89.11
PGSC0003DMT400083041	Potato	cytosol, peroxisome, plasma membrane	88.83	89.02
KRH54497	Soybean	endoplasmic reticulum, extracellular, mitochondrion, nucleus	88.62	88.81
KRH18509	Soybean	endoplasmic reticulum	82.25	88.74
KRH63412	Soybean	endoplasmic reticulum	88.52	88.7
AT5G62670.1	Thale cress	peroxisome	88.0	88.18
CDY45757	Canola	peroxisome	88.52	88.15
VIT_14s0066g02550.t01	Wine grape	cytosol, peroxisome, plasma membrane	87.47	87.75
CDY30730	Canola	plasma membrane	71.71	87.29
AT3G47950.1	Thale cress	peroxisome	86.95	86.77
PGSC0003DMT400065168	Potato	cytosol, peroxisome, plasma membrane	89.67	86.77
KRG93484	Soybean	extracellular	86.43	86.61
TraesCS2D01G503000.1	Wheat	golgi, plastid, unclear	79.02	79.6
TraesCS6D01G344000.1	Wheat	peroxisome	76.72	77.37
TraesCS1D01G257600.1	Wheat	peroxisome	77.04	77.12
TraesCS7D01G500200.1	Wheat	peroxisome	75.78	76.5
TraesCS7D01G146700.1	Wheat	peroxisome	74.53	75.48
Bra029249.1-P	Field mustard	plastid	88.52	72.29
TraesCS4D01G298900.3	Wheat	nucleus, peroxisome, plasma membrane	67.85	66.39
Solyc02g088060.1.1	Tomato	cytosol	16.49	52.32
PGSC0003DMT400003602	Potato	peroxisome	48.64	51.1

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0008553	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0120029	InterPro:HAD-like_sf
InterPro:IPR023299	InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF5	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS5D01G013100	EnsemblPlants:TraesCS5D01G013100.2	TIGR:cd02076	SEG:seg	:	:

Description

No Description!

Coordinates

chr5D:-:7014164..7019865

Molecular Weight (calculated)

105493.0 Da

IEP (calculated)

6.776

GRAVY (calculated)

0.074

Length

958 amino acids

Sequence
(BLAST)

001: MAEKEAGNLD AVLKEVVDLE NIPLEEVLEN LRCSREGLTA EQAQQRLQIF GANKLEEKEE SKVLKFLGFM WNPLSWVMEA AAIMAIALAN GGNKPPDWQD
101: FIGIITLLVI NSTISFIEEN NAGNAAAALM ARLAPKAKIL RDGRWTEEDA AILVPGDVIS IKLGDIIPAD ARLLEGDPLK IDQSALTGES LPATKGPGDG
201: VYSGSTVKQG EIEAVVIATG VHTFFGKAAH LVDSTNQVGH FQKVLTAIGN FCICSIGVGM FIEIIVMYPI QHRAYRPGID NLLVLLIGGI PIAMPTVLSV
301: TMAIGSHRLS QQGAITKRMT AIEEMAGMDV LCSDKTGTLT LNKLTVDKNL VEVFERGITQ DQVILMAARA SRTENQDAID TAIVGMLADP KEARAGIQEV
401: HFLPFNPTDK RTALTYIDAD GKMHRVSKGA PEQILHLAHN TSEIERRVHA VIDKFAERGL RSLAVAYQEV PDGRKESPGG PWHFAGLMPL FDPPRHDSAE
501: TIRRALNLGV NVKMITGDQL AIGKETGRRL GMGTNMYPSS ALLGQKNSDE SISALPVDDL IEKADGFAGV FPEHKYEIVK RLQARKHICG MTGDGVNDAP
601: ALKKADIGIA VADATDAARS ASDIVLTEPG LSVIISAVLT SRAIFQRMKN YTIYAVSITI RIVLGFMLLA LIWKFDFPPF MVLIIAILND GTIMTISKDR
701: VKPSPLPDSW KLAEIFTTGV ILGGYLAIMT VIFFWAAYKT NFFPRLFHVE SLEKTAQDDF QKLAAAIYLQ VSTISQALIF VTRSRSWSFA ERPGFLLVFA
801: FLVAQLIATL IAVYADWRFT QIKGIGWGWA GVVWLYNIIT YLPLDIIKFL IRYTLSGKAW DLVIDQRIAF TRKKDFGKEE RELKWAHAQR TLHGLQPPDA
901: KMFSEKGGYN ELNHMAEEAK RRAEIARLRE LHTLKGHVES VVKLKGLDIE TIQQSYTV

Best Arabidopsis Sequence Match ( AT5G62670.1 )
(BLAST)

001: MGDKEEVLEA VLKETVDLEN VPIEEVFESL RCSREGLTTE AADERLALFG HNKLEEKKES KFLKFLGFMW NPLSWVMEAA AIMAIALANG GGKPPDWQDF
101: VGIITLLVIN STISFIEENN AGNAAAALMA RLAPKAKVLR DGRWGEQDAA ILVPGDIISI KLGDIVPADA RLLEGDPLKI DQSSLTGESL PVTKGPGDGV
201: YSGSTCKQGE LEAVVIATGV HTFFGKAAHL VDTTNHVGHF QQVLTAIGNF CICSIAVGMI IEIVVMYPIQ HRAYRPGIDN LLVLLIGGIP IAMPTVLSVT
301: MAIGSHRLSQ QGAITKRMTA IEEMAGMDVL CSDKTGTLTL NKLTVDKNLI EVFTKGVDAD TVVLMAAQAS RLENQDAIDA AIVGMLADPK EARAGVREVH
401: FLPFNPTDKR TALTYIDSDG KMHRVSKGAP EQILNLAHNR AEIERRVHAV IDKFAERGLR SLAVAYQEVP EGTKESAGGP WQFMGLMPLF DPPRHDSAET
501: IRRALNLGVN VKMITGDQLA IGKETGRRLG MGTNMYPSSA LLGQHKDESI GALPIDDLIE KADGFAGVFP EHKYEIVKRL QARKHICGMT GDGVNDAPAL
601: KKADIGIAVA DATDAARSAS DIVLTEPGLS VIISAVLTSR AIFQRMKNYT IYAVSITIRI VLGFMLLALI WKFDFPPFMV LIIAILNDGT IMTISKDRVK
701: PSPLPDSWKL SEIFATGVVF GSYMAMMTVI FFWAAYKTDF FPRTFGVSTL EKTAHDDFRK LASAIYLQVS IISQALIFVT RSRSWSYVER PGMLLVVAFI
801: LAQLVATLIA VYANWSFAAI EGIGWGWAGV IWLYNIVFYI PLDIIKFLIR YALSGRAWDL VIEQRVAFTR QKDFGKEQRE LQWAHAQRTL HGLQAPDAKM
901: FPERTHFNEL SQMAEEAKRR AEIARLRELH TLKGHVESVV RLKGLDIETI QQAYTV

Arabidopsis Description

AHA11ATPase 11, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9LV11]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.