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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • cytosol 2
  • plastid 1
  • plasma membrane 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:cytosol
EpiLoc:plastid
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
 extracellular: 25724908
msms PMID: 25724908 doi
VC Clarke, PC Loughlin, A Gavrin, C Chen, EM Brear, DA Day, PM Smith
From the ‡University of Sydney, School of Biological Sciences, Sydney Australia;, From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; penny.smith@sydney.edu.au., From the ‡University of Sydney, School of Biological Sciences, Sydney Australia; §Flinders University, School of Biological Sciences, Adelaide Australia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH18509 Soybean endoplasmic reticulum 90.9 97.86
VIT_14s0066g02550.t01 Wine grape cytosol, peroxisome, plasma membrane 90.48 90.58
GSMUA_Achr4P22290_001 Banana plasma membrane 88.39 89.61
KRH54497 Soybean endoplasmic reticulum, extracellular, mitochondrion, nucleus 89.12 89.12
GSMUA_Achr4P22300_001 Banana plasma membrane 89.02 89.11
KRH63412 Soybean endoplasmic reticulum 89.02 89.02
KRH56972 Soybean cytosol, peroxisome, plasma membrane 88.91 89.01
GSMUA_Achr9P10970_001 Banana cytosol, peroxisome, plasma membrane 88.6 88.69
KRH03407 Soybean endoplasmic reticulum 88.28 88.38
Os12t0638700-01 Rice plasma membrane 87.87 87.87
KXG37819 Sorghum peroxisome 87.45 87.63
Zm00001d019062_P005 Maize plasma membrane 81.38 87.61
Os03t0689300-01 Rice plasma membrane 87.55 87.55
EES16456 Sorghum cytosol, peroxisome, plasma membrane 87.45 87.45
Zm00001d041214_P003 Maize plasma membrane 87.34 87.34
Zm00001d033552_P003 Maize peroxisome 86.92 87.11
Os07t0191200-01 Rice plasma membrane 86.61 86.52
TraesCS5A01G004200.1 Wheat golgi, unclear 86.61 86.43
TraesCS5D01G013100.2 Wheat golgi 86.61 86.43
EER96010 Sorghum cytosol, peroxisome, plasma membrane 86.3 86.3
TraesCS4A01G283100.2 Wheat nucleus 86.3 86.03
TraesCS4D01G027900.1 Wheat peroxisome 86.09 86.0
HORVU4Hr1G004820.7 Barley peroxisome 86.3 85.76
TraesCS5A01G004300.2 Wheat cytosol, peroxisome, plasma membrane 84.94 85.03
Zm00001d021000_P008 Maize cytosol, peroxisome, plasma membrane 41.53 84.83
TraesCS4A01G282900.1 Wheat plasma membrane 75.84 84.3
TraesCSU01G073200.3 Wheat plasma membrane 86.61 83.64
TraesCS4B01G031000.1 Wheat plasma membrane 78.97 81.89
HORVU5Hr1G000780.15 Barley golgi, mitochondrion, plasma membrane 84.94 81.69
Zm00001d007775_P001 Maize peroxisome 55.86 80.66
KRH02845 Soybean endoplasmic reticulum 80.33 80.59
KRH47385 Soybean endoplasmic reticulum 79.71 80.3
KRH12255 Soybean endoplasmic reticulum 80.13 80.21
KRH09668 Soybean endoplasmic reticulum 79.6 80.19
KRH19045 Soybean endoplasmic reticulum 79.5 80.08
KRH04967 Soybean plasma membrane 79.6 80.02
KRH44521 Soybean endoplasmic reticulum 79.18 79.77
KRH23631 Soybean plasma membrane 79.18 79.77
KRH16128 Soybean endoplasmic reticulum, mitochondrion, nucleus 79.29 79.71
KRH61927 Soybean endoplasmic reticulum, mitochondrion 78.97 79.39
KRH52590 Soybean cytosol, peroxisome, plasma membrane 78.87 79.28
KRH66539 Soybean peroxisome, plasma membrane 76.99 78.13
KRH48806 Soybean endoplasmic reticulum 77.82 77.5
KRH03539 Soybean endoplasmic reticulum 76.26 76.98
KRH20096 Soybean endoplasmic reticulum, mitochondrion 76.05 76.77
KRH12960 Soybean endoplasmic reticulum 69.04 76.57
KRH68997 Soybean plasma membrane 73.85 75.59
KRH37283 Soybean plasma membrane 80.13 75.32
KRH16408 Soybean cytosol, extracellular, plasma membrane 14.33 72.87
KRH16612 Soybean peroxisome 16.42 48.46
KRH16357 Soybean cytosol 9.21 45.83
KRH52592 Soybean extracellular, plasma membrane 3.24 42.47
KRH43127 Soybean plasma membrane 18.62 23.67
KRH59277 Soybean mitochondrion 21.03 20.83
Protein Annotations
KEGG:00190+3.6.3.6Gene3D:1.20.1110.10EntrezGene:100805218MapMan:24.1.2.3.1Gene3D:3.40.1110.10EMBL:ACUP02011568
InterPro:ATPase_P-typ_P_siteInterPro:ATPase_P-typ_TM_dom_sfInterPro:ATPase_P-typ_cation-transptr_NInterPro:ATPase_P-typ_cyto_dom_NInterPro:ATPase_P-typ_transduc_dom_A_sfncoils:Coil
EnsemblPlantsGene:GLYMA_19G019200GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488
GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006139GO:GO:0006754
GO:GO:0006810GO:GO:0006811GO:GO:0008150GO:GO:0008152GO:GO:0008553GO:GO:0009058
GO:GO:0009987GO:GO:0015992GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887
GO:GO:0046872GO:GO:0120029GO:GO:1902600InterPro:HAD-like_sfInterPro:IPR023299UniProt:K7MW11
EnsemblPlants:KRG93484ProteinID:KRG93484ProteinID:KRG93484.1InterPro:P-type_ATPase_IIIAPFAM:PF00122PFAM:PF00690
PFAM:PF00702PRINTS:PR00119PRINTS:PR00120ScanProsite:PS00154PANTHER:PTHR42861PANTHER:PTHR42861:SF5
InterPro:P_typ_ATPaseSMART:SM00831SUPFAM:SSF56784SUPFAM:SSF81653SUPFAM:SSF81665TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01647TMHMM:TMhelixUniParc:UPI000233EEADSEG:seg::
Description
hypothetical protein
Coordinates
chr19:+:2051713..2060086
Molecular Weight (calculated)
105489.0 Da
IEP (calculated)
7.052
GRAVY (calculated)
0.096
Length
956 amino acids
Sequence
(BLAST)
001: MAEKEEAMRV VLKEAVDLEN VPLEEVFQTL RCDSNGLTTE SAEERLAIFG HNKLEEKKES KVLKFLGFMW NPLSWVMEAA AIMAIALANG GGKPPDWQDF
101: VGIITLLIIN STISFIEENN AGNAAAALMA RLAPKAKFLR DGKWVEEDAS ILVPGDIISV KLGDIIPADA RLLEGDPLKI DQSALTGESL PVTKGHGDSV
201: YSGSTCKQGE INAVVIATGV HTFFGKAAHL VDSTNQVGHF QKVLTAIGNF CICSIAVGMI VEIIVMYPIQ HREYRPGIDN LLVLLIGGIP IAMPTVLSVT
301: MAIGSHRLAQ QGAITKRMTA IEEMAGMDVL CSDKTGTLTL NKLTVDKNLI EIFAKGVDVD TVVLMAARAA RLENQDAIDA SIVGMLGDPK EARAGIQEVH
401: FLPFNPTDKR TAITYIDSES KMHRVSKGAP EQILNLARNK SEIERRVHSV IDKFADRGLR SLAVAYQEVP DGKKESQGGP WQFIGLLPLF DPPRHDSAQT
501: IRRALNLGVN VKMITGDQLA IGKETGRRLG MGTNMYPSSA LLGQNKDESI ATLPVDELIE KADGFAGVFP EHKYEIVKRL QARKHICGMT GDGVNDAPAL
601: KKADIGIAVA DATDAARSAS DIVLTEPGLS VIISAVLTSR AIFQRMKNYT IYAVSITIRI VLGFMLLALI WQFDFPPFMV LIIAILNDGT IMTISKDRVK
701: PSPYPDSWKL AEIFTTGIIL GGYLAMMTVI FFWAAYKTDF FPQTFGVSSL QKKDRDDFRK LASAIYLQVS TVSQALIFVT RARSWSFVER PGLLLVAAFV
801: IAQLIATLIA VYANWSFAAI EGIGWGWAGV VWLYNLVFYI PLDFIKFIIR YALSGRAWDL VIEQRIAFTR KKDFGKEERE LKWAHAHRTL HGLHPPETKM
901: FNERTSYTEL NQMAEEARRR ANIARLRELH TLTGHVESVF RLKGLDIDTI QQAYTI
Best Arabidopsis Sequence Match ( AT2G07560.1 )
(BLAST)
001: MAADISWDEI KKENVDLEKI PVDEVFQQLK CSREGLSSEE GRNRLQIFGA NKLEEKVENK FLKFLGFMWN PLSWVMEAAA IMAIVLANGG GRPPDWQDFV
101: GITCLLIINS TISFIEENNA GNAAAALMAN LAPKTKVLRD GRWGEQEAAI LVPGDLISIK LGDIVPADAR LLEGDPLKID QSALTGESLP ATKHQGDEVF
201: SGSTCKQGEI EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ KVLTAIGNFC ICSIGIGMLI EIIIMYPIQH RKYRDGIDNL LVLLIGGIPI AMPTVLSVTM
301: AIGSHRLSQQ GAITKRMTAI EEMAGMDVLC SDKTGTLTLN KLTVDKNLIE VFSKDVDKDY VILLSARASR VENQDAIDTS IVNMLGDPKE ARAGITEVHF
401: LPFNPVEKRT AITYIDTNGE WHRCSKGAPE QIIELCDLKG ETKRRAHEII DKFAERGLRS LGVARQRVPE KDKESAGTPW EFVGLLPLFD PPRHDSAETI
501: RRALDLGVNV KMITGDQLAI GKETGRRLGM GTNMYPSSSL LENKDDTTGG VPVDELIEKA DGFAGVFPEH KYEIVRKLQE RKHIVGMTGD GVNDAPALKK
601: ADIGIAVDDA TDAARSASDI VLTEPGLSVI VSAVLTSRAI FQRMKNYTIY AVSITIRIVL GFMLVALIWE FDFSPFMVLI IAILNDGTIM TISKDRVKPS
701: PIPDSWKLKE IFATGVVLGT YMALVTVVFF WLAHDTTFFS DKFGVRSLQG KDEELIAVLY LQVSIISQAL IFVTRSRSWS FVERPGLLLL IAFFVAQLIA
801: TLIATYAHWE FARIKGCGWG WCGVIWIYSI VTYIPLDILK FITRYTLSGK AWNNMIENRT AFTTKKDYGR GEREAQWALA QRTLHGLKPP ESMFEDTATY
901: TELSEIAEQA KKRAEVARLR EVHTLKGHVE SVVKLKGLDI DNLNQHYTV
Arabidopsis Description
AHA6ATPase 6, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SH76]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.