CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

cytosol 1
plastid 1
peroxisome 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g005040.2.1	Tomato	cytosol, plasma membrane	38.52	84.91
CDY69631	Canola	cytosol, peroxisome, plasma membrane	51.51	84.73
CDY67606	Canola	peroxisome	49.54	84.22
KRH20096	Soybean	endoplasmic reticulum, mitochondrion	90.26	82.15
KRH03539	Soybean	endoplasmic reticulum	90.26	82.15
AT3G42640.1	Thale cress	peroxisome	83.64	76.05
Bra008288.1-P	Field mustard	cytosol, peroxisome, plasma membrane	83.29	75.74
PGSC0003DMT400030913	Potato	cytosol, peroxisome, plasma membrane	82.48	74.76
Solyc12g010360.1.1	Tomato	plasma membrane	80.05	74.68
CDX93092	Canola	peroxisome	82.13	74.6
Bra013168.1-P	Field mustard	peroxisome	82.13	74.6
PGSC0003DMT400020414	Potato	plasma membrane	79.93	74.57
CDY50939	Canola	peroxisome	82.02	74.5
AT2G07560.1	Thale cress	peroxisome	81.9	74.39
KRH52590	Soybean	cytosol, peroxisome, plasma membrane	80.86	73.29
KRH61927	Soybean	endoplasmic reticulum, mitochondrion	80.74	73.19
KRH47385	Soybean	endoplasmic reticulum	80.39	73.02
KRH23631	Soybean	plasma membrane	80.39	73.02
KRH16408	Soybean	cytosol, extracellular, plasma membrane	15.89	72.87
KRH12255	Soybean	endoplasmic reticulum	80.51	72.67
KRH04967	Soybean	plasma membrane	80.16	72.66
KRH16128	Soybean	endoplasmic reticulum, mitochondrion, nucleus	79.93	72.45
KRH02845	Soybean	endoplasmic reticulum	80.05	72.4
KRH09668	Soybean	endoplasmic reticulum	79.7	72.39
KRH19045	Soybean	endoplasmic reticulum	79.23	71.97
KRH44521	Soybean	endoplasmic reticulum	79.0	71.76
KRH18509	Soybean	endoplasmic reticulum	72.62	70.5
KRH63412	Soybean	endoplasmic reticulum	77.61	69.98
KRH54497	Soybean	endoplasmic reticulum, extracellular, mitochondrion, nucleus	77.61	69.98
KRH56972	Soybean	cytosol, peroxisome, plasma membrane	77.38	69.84
KRH03407	Soybean	endoplasmic reticulum	77.15	69.63
KRH68997	Soybean	plasma membrane	74.94	69.16
KRG93484	Soybean	extracellular	76.57	69.04
KRH37283	Soybean	plasma membrane	80.28	68.04
KRH66539	Soybean	peroxisome, plasma membrane	73.78	67.52
KRH48806	Soybean	endoplasmic reticulum	74.25	66.67
VIT_02s0488g00010.t01	Wine grape	cytosol	13.69	63.44
KRH16612	Soybean	peroxisome	14.39	38.27
KRH16357	Soybean	cytosol	8.0	35.94
KRH52592	Soybean	extracellular, plasma membrane	3.02	35.62
HORVU4Hr1G086810.1	Barley	peroxisome, plasma membrane	15.43	31.74
Os11t0485200-01	Rice	extracellular	33.06	30.88
Zm00001d027304_P026	Maize	plasma membrane	31.9	30.86
KXG40399	Sorghum	plasma membrane	31.21	30.19
Os03t0107100-00	Rice	mitochondrion	13.92	28.64
KRH43127	Soybean	plasma membrane	19.49	22.34
KRH59277	Soybean	mitochondrion	22.39	20.0

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	EntrezGene:102668626	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	EMBL:ACUP02009491
InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	EnsemblPlantsGene:GLYMA_15G207900
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810
GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0008553	GO:GO:0009058	GO:GO:0009987
GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0046872
GO:GO:0120029	GO:GO:1902600	InterPro:HAD-like_sf	UniProt:I1MI27	InterPro:IPR023299	EnsemblPlants:KRH12960
ProteinID:KRH12960	ProteinID:KRH12960.1	InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702
PRINTS:PR00119	PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF40	InterPro:P_typ_ATPase
SMART:SM00831	SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647
TMHMM:TMhelix	UniParc:UPI000295221E	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:+:29813502..29820484

Molecular Weight (calculated)

94358.8 Da

IEP (calculated)

5.608

GRAVY (calculated)

0.149

Length

862 amino acids

Sequence
(BLAST)

001: MASDDISFED LKKENIDLEN IPVEEVFEKL KCTREGLTSA EGEKRLQIFG PNKLEEKKDS KLRKFLGFMW NPLSWVMECA AIMAIVLANG GGKPPDWQDF
101: TGIVVLLIIN STISFIEENN AGNAAAALMA GLAPKTKVLR DGKWSEEEAA ILVPGDVISI KLGVIVPADA RLLEGDPLKI DQSALTGESL PVTRNPGQQV
201: FSGSTCKQGE IEAVVIATGV HTFFGKAAHL VDSTNNVGHF QKVLTSIGNF CICSIAVGML IELVVMYPIQ KRSYRDGIDN LLVLLIGGIP IAMPTVLSVT
301: MAIGSHRLSQ QGAITKRMTA IEEMAGMDIL CSDKTGTLTL NKLTVDKSLI EVFPTGMDKD TLVLYAARAS RTENQDAIDA SIVGMLDDRK EARAGITEVH
401: FLPFNPVDKR TAITFIDNNG DWHRSSKGAP EEIIELCGLK GETLKKAHKV IDEFANRGLR SLGVSRQTVS ERTKESAGDA WEFLGLLPLF DPPRHDSSET
501: IRRALELGVN VKMITGDQLA IGKETGRRLG MGTNMYPSSS LLGESKDNAL ATMSIDELIE KADGFAGVFP EHKYEIVKRL QDRNHIVGMT GDGVNDAPAL
601: KKADIGIAVD DATDAARSAS DIVLTEPGLS VIVSAVLTSR AIFQRMKNYT IYAVSITIRI VFGFMLVALI WKFDFSPFMV LIIAILNDGT IMTISKDRVK
701: PSPLPDSWKL KEIFATGIVL GAYMAIITAV FFYVVHDTSF FSNIFGVSPI AESEEQLNSA LYLQVSIISQ ALIFVTRSRS WSYFERPGIM LCVAFICAQL
801: VATVIAVYAH WDFARINGVG WRWAGVIWIY SIITYIPLDI LKFLIRMGLT GSAGDNMHQN KV

Best Arabidopsis Sequence Match ( AT1G80660.1 )
(BLAST)

001: MAGNKDSSWD DIKNEGIDLE KIPIEEVLTQ LRCTREGLTS DEGQTRLEIF GPNKLEEKKE NKVLKFLGFM WNPLSWVMEL AAIMAIALAN GGGRPPDWQD
101: FVGITVLLII NSTISFIEEN NAGNAAAALM AGLAPKTKVL RDGKWSEQEA AILVPGDIIS IKLGDIVPAD GRLLDGDPLK IDQSALTGES LPVTKHPGQE
201: VYSGSTCKQG ELEAVVIATG VHTFFGKAAH LVDSTNQEGH FQKVLTAIGN FCICSIAIGM LIEIVVMYPI QKRAYRDGID NLLVLLIGGI PIAMPTVLSV
301: TMAIGSHRLS QQGAITKRMT AIEEMAGMDV LCSDKTGTLT LNKLTVDKSM VEVFVKDLDK DQLLVNAARA SRVENQDAID ACIVGMLGDP REAREGITEV
401: HFFPFNPVDK RTAITYIDAN GNWHRVSKGA PEQIIELCNL REDASKRAHD IIDKFADRGL RSLAVGRQTV SEKDKNSPGE PWQFLGLLPL FDPPRHDSAE
501: TIRRALDLGV NVKMITGDQL AIGKETGRRL GMGTNMYPSS ALLGQDKDES IASLPVDELI EKADGFAGVF PEHKYEIVKR LQEMKHICGM TGDGVNDAPA
601: LKRADIGIAV ADATDAARSA SDIVLTEPGL SVIVSAVLTS RAIFQRMKNY TIYAVSITIR IVMGFMLLAL IWKFDFSPFM VLIVAILNDG TIMTISKDRV
701: KPSPLPDSWK LKEIFATGVV LGTYLAVMTV VFFWAAESTD FFSAKFGVRS ISGNPHELTA AVYLQVSIVS QALIFVTRSR SWSYVERPGF WLISAFFMAQ
801: LIATLIAVYA NWNFARIRGI GWGWAGVIWL YSIVFYIPLD ILKFIIRYSL SGRAWDNVIE NKTAFTSKKD YGKGEREAQW AQAQRTLHGL QPAQTSDMFN
901: DKSTYRELSE IADQAKRRAE VARLRERHTL KGHVESVVKQ KGLDIEAIQQ HYTL

Arabidopsis Description

AHA9ATPase 9, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q42556]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.