Factsheet for Solyc07g005040.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67606	Canola	peroxisome	85.42	65.88
CDY69631	Canola	cytosol, peroxisome, plasma membrane	85.42	63.74
VIT_02s0488g00010.t01	Wine grape	cytosol	29.92	62.9
Solyc02g011700.1.1	Tomato	extracellular	13.3	46.85
PGSC0003DMT400030913	Potato	cytosol, peroxisome, plasma membrane	97.7	40.17
KRH12960	Soybean	endoplasmic reticulum	84.91	38.52
Solyc12g010360.1.1	Tomato	plasma membrane	87.72	37.12
Bra013168.1-P	Field mustard	peroxisome	86.44	35.62
CDX93092	Canola	peroxisome	86.44	35.62
CDY50939	Canola	peroxisome	86.44	35.62
AT2G07560.1	Thale cress	peroxisome	86.44	35.62
KRH03539	Soybean	endoplasmic reticulum	86.19	35.59
KRH20096	Soybean	endoplasmic reticulum, mitochondrion	85.68	35.37
AT3G42640.1	Thale cress	peroxisome	85.42	35.23
Bra008288.1-P	Field mustard	cytosol, peroxisome, plasma membrane	85.42	35.23
Solyc07g017780.2.1	Tomato	nucleus, unclear	83.89	33.99
Solyc03g113400.2.1	Tomato	nucleus	82.86	33.89
Solyc06g071100.2.1	Tomato	nucleus, plastid	82.1	33.58
Solyc03g117150.2.1	Tomato	unclear	79.54	32.6
Solyc08g078200.1.1	Tomato	plastid	77.24	31.26
Os03t0107100-00	Rice	mitochondrion	28.9	26.97
HORVU4Hr1G086810.1	Barley	peroxisome, plasma membrane	28.13	26.25
Solyc02g088060.1.1	Tomato	cytosol	19.95	25.83
Zm00001d027304_P026	Maize	plasma membrane	33.5	14.7
KXG40399	Sorghum	plasma membrane	32.23	14.14
Os11t0485200-01	Rice	extracellular	32.23	13.65

Protein Annotations

Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_transduc_dom_A_sf
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	UniProt:K4CAX6	PFAM:PF00122	PFAM:PF00690	PRINTS:PR00119	ScanProsite:PS00154
PANTHER:PTHR42861	PANTHER:PTHR42861:SF25	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF81653	SUPFAM:SSF81665
EnsemblPlantsGene:Solyc07g005040.2	EnsemblPlants:Solyc07g005040.2.1	TIGRFAMs:TIGR01494	TMHMM:TMhelix	UniParc:UPI000276BBC3	SEG:seg

Description

No Description!

Coordinates

chr7:-:90358..92771

Molecular Weight (calculated)

41919.3 Da

IEP (calculated)

4.719

GRAVY (calculated)

0.163

Length

391 amino acids

Sequence
(BLAST)

001: MASNLSLEDI KNEQIDLENI PVEEVFQQLK CSKEGLSSAE GQKRLEIFGP NKLEEKKENK LLKFLGFMWN PLSWVMECAA IMAIVLANGG GKPPDWPDFV
101: GITVLLIINS TISFIEENSA GNAASALMAN LAPKTKILRD GKWSEEEASI LVPGDIISIK LGDIVPADAR LLEGDPLKVD QAALTGESLP ATKFPGAEVF
201: SGSTVKQGEI EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ KVLTAIGNFC ICSIAVGMVI EIIVMYPIQQ RKYRDGIDNL LVLLIGGIPI AMPTVLSVTM
301: AIGSHRLAQQ GAITKRMTAI EEMAGMDVLC SDKTGTLTLN KLTVDKNLIE VFPKDATKDT VMLLGARASR IENQDAIDTC IVNMLGDPKX X

Best Arabidopsis Sequence Match ( AT2G07560.1 )
(BLAST)

001: MAADISWDEI KKENVDLEKI PVDEVFQQLK CSREGLSSEE GRNRLQIFGA NKLEEKVENK FLKFLGFMWN PLSWVMEAAA IMAIVLANGG GRPPDWQDFV
101: GITCLLIINS TISFIEENNA GNAAAALMAN LAPKTKVLRD GRWGEQEAAI LVPGDLISIK LGDIVPADAR LLEGDPLKID QSALTGESLP ATKHQGDEVF
201: SGSTCKQGEI EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ KVLTAIGNFC ICSIGIGMLI EIIIMYPIQH RKYRDGIDNL LVLLIGGIPI AMPTVLSVTM
301: AIGSHRLSQQ GAITKRMTAI EEMAGMDVLC SDKTGTLTLN KLTVDKNLIE VFSKDVDKDY VILLSARASR VENQDAIDTS IVNMLGDPKE ARAGITEVHF
401: LPFNPVEKRT AITYIDTNGE WHRCSKGAPE QIIELCDLKG ETKRRAHEII DKFAERGLRS LGVARQRVPE KDKESAGTPW EFVGLLPLFD PPRHDSAETI
501: RRALDLGVNV KMITGDQLAI GKETGRRLGM GTNMYPSSSL LENKDDTTGG VPVDELIEKA DGFAGVFPEH KYEIVRKLQE RKHIVGMTGD GVNDAPALKK
601: ADIGIAVDDA TDAARSASDI VLTEPGLSVI VSAVLTSRAI FQRMKNYTIY AVSITIRIVL GFMLVALIWE FDFSPFMVLI IAILNDGTIM TISKDRVKPS
701: PIPDSWKLKE IFATGVVLGT YMALVTVVFF WLAHDTTFFS DKFGVRSLQG KDEELIAVLY LQVSIISQAL IFVTRSRSWS FVERPGLLLL IAFFVAQLIA
801: TLIATYAHWE FARIKGCGWG WCGVIWIYSI VTYIPLDILK FITRYTLSGK AWNNMIENRT AFTTKKDYGR GEREAQWALA QRTLHGLKPP ESMFEDTATY
901: TELSEIAEQA KKRAEVARLR EVHTLKGHVE SVVKLKGLDI DNLNQHYTV

Arabidopsis Description

AHA6ATPase 6, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9SH76]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.