Factsheet for Solyc07g017780.2.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear, nucleus

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, unclear
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

unclear: 26455813
nucleus: 28394025

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010497	Potato	cytosol, peroxisome, plasma membrane	97.41	98.74
Solyc07g005040.2.1	Tomato	cytosol, plasma membrane	33.99	83.89
Solyc03g117150.2.1	Tomato	unclear	81.24	82.18
Solyc06g071100.2.1	Tomato	nucleus, plastid	80.52	81.28
Solyc03g113400.2.1	Tomato	nucleus	80.1	80.86
Solyc12g010360.1.1	Tomato	plasma membrane	77.41	80.84
Solyc08g078200.1.1	Tomato	plastid	75.13	75.05
Solyc02g088060.1.1	Tomato	cytosol	15.54	49.67
Solyc02g011700.1.1	Tomato	extracellular	5.28	45.95

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	Gene3D:3.40.50.1000	InterPro:ATPase_P-typ_P_site
InterPro:ATPase_P-typ_TM_dom_sf	InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006139	GO:GO:0006754	GO:GO:0006810	GO:GO:0006811
GO:GO:0008150	GO:GO:0008152	GO:GO:0008553	GO:GO:0009058	GO:GO:0009987	GO:GO:0015992
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0046872	GO:GO:0120029
GO:GO:1902600	InterPro:HAD-like_sf	InterPro:HAD_sf	InterPro:IPR023214	InterPro:IPR023299	UniProt:K4CCJ2
InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119	PRINTS:PR00120
ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF41	InterPro:P_typ_ATPase	SMART:SM00831	SUPFAM:SSF56784
SUPFAM:SSF81653	SUPFAM:SSF81665	EnsemblPlantsGene:Solyc07g017780.2	EnsemblPlants:Solyc07g017780.2.1	TIGRFAMs:TIGR01494	TIGRFAMs:TIGR01647
TMHMM:TMhelix	UniParc:UPI000276C1B6	SEG:seg	:	:	:

Description

Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:K4CCJ2]

Coordinates

chr7:+:8095828..8102636

Molecular Weight (calculated)

106517.0 Da

IEP (calculated)

6.237

GRAVY (calculated)

0.043

Length

965 amino acids

Sequence
(BLAST)

001: MAKAISLEEI KNETVDLTSL VNIQNEVTDE EKIPIEEVFE QLKCSREGLT SDEGANRLQI FGPNKLEEKK ESKILKFLGF MWNPLSWVME MAAIMAIALA
101: NGDGKPPDWQ DFVGIVCLLV INSTISFIEE NNAGNAAAAL MAGLAPKTKV LRDGRWSEQE AAILVPGDII SVKLGDIVPA DARLLEGDPL KIDQSALTGE
201: SLPVTKNPGD EVFSGSTCKQ GELEAVVIAT GVHTFFGKAA HLVDSTNNVG HFQKVLTAIG NFCICSIAIG MLVEIIVMYP IQHRKYRDGI DNLLVLLIGG
301: IPIAMPTVLS VTMAIGSHRL SQQGAITKRM TAIEEMAGMD VLCSDKTGTL TLNKLSVDRS LVEVFTKGVD KEYVLLLAAR ASRVENQDAI DACMVGMLAD
401: PKEARAGIRE VHFLPFNPVD KRTALTYIDS NGNWHRASKG APEQILDLCN CKEDVRRKVH SMIDKYAERG LRSLAVARQE VPEKSKESTG GPWQFVGLLP
501: LFDPPRHDSA ETIRRALNLG VNVKMITGDQ LAIAKETGRR LGMGTNMYPS ASLLGQDKDS SIASLPVEEL IEKADGFAGV FPEHKYEIVK KLQERKHIVG
601: MTGDGVNDAP ALKKADIGIA VADATDAARG ASDIVLTEPG LSVIISAVLT SRAIFQRMKN YTIYAVSITI RIVFGFMLIA LIWKYDFSAF MVLIIAILND
701: GTIMTISKDR VKPSPMPDSW KLNEIFATGV VLGGYQALMT VIFFWAMHDT SFFTDKFGVK DIRESDEEMM SALYLQVSII SQALIFVTRS RSWSFVERPG
801: ALLMIAFLIA QLVATLIAVY ADWTFARVKG CGWGWAGVIW IFSIVTYFPL DIMKFAIRYI LSGKAWNNLL DNKTAFTTKK DYGKEEREAQ WALAQRTLHG
901: LQPPEASNLF NEKNSYRELS EIAEQAKRRA EMARLRELHT LKGHVESVVK LKGLDIETIQ QHYTV

Best Arabidopsis Sequence Match ( AT2G18960.1 )
(BLAST)

001: MSGLEDIKNE TVDLEKIPIE EVFQQLKCTR EGLTTQEGED RIVIFGPNKL EEKKESKILK FLGFMWNPLS WVMEAAALMA IALANGDNRP PDWQDFVGII
101: CLLVINSTIS FIEENNAGNA AAALMAGLAP KTKVLRDGKW SEQEAAILVP GDIVSIKLGD IIPADARLLE GDPLKVDQSA LTGESLPVTK HPGQEVFSGS
201: TCKQGEIEAV VIATGVHTFF GKAAHLVDST NQVGHFQKVL TSIGNFCICS IAIGIAIEIV VMYPIQHRKY RDGIDNLLVL LIGGIPIAMP TVLSVTMAIG
301: SHRLSQQGAI TKRMTAIEEM AGMDVLCSDK TGTLTLNKLS VDKNLVEVFC KGVEKDQVLL FAAMASRVEN QDAIDAAMVG MLADPKEARA GIREVHFLPF
401: NPVDKRTALT YIDSDGNWHR VSKGAPEQIL DLANARPDLR KKVLSCIDKY AERGLRSLAV ARQVVPEKTK ESPGGPWEFV GLLPLFDPPR HDSAETIRRA
501: LNLGVNVKMI TGDQLAIGKE TGRRLGMGTN MYPSAALLGT DKDSNIASIP VEELIEKADG FAGVFPEHKY EIVKKLQERK HIVGMTGDGV NDAPALKKAD
601: IGIAVADATD AARGASDIVL TEPGLSVIIS AVLTSRAIFQ RMKNYTIYAV SITIRIVFGF MLIALIWEFD FSAFMVLIIA ILNDGTIMTI SKDRVKPSPT
701: PDSWKLKEIF ATGIVLGGYQ AIMSVIFFWA AHKTDFFSDK FGVRSIRDNN DELMGAVYLQ VSIISQALIF VTRSRSWSFV ERPGALLMIA FVIAQLVATL
801: IAVYADWTFA KVKGIGWGWA GVIWIYSIVT YFPQDILKFA IRYILSGKAW ASLFDNRTAF TTKKDYGIGE REAQWAQAQR TLHGLQPKED VNIFPEKGSY
901: RELSEIAEQA KRRAEIARLR ELHTLKGHVE SVAKLKGLDI DTAGHHYTV

Arabidopsis Description

AHA1Plasma membrane ATPase [Source:UniProtKB/TrEMBL;Acc:A0A178VSN5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.