Factsheet for Solyc03g117150.2.1

Subcellular Localization

min:

: max

Winner_takes_all: unclear

Predictor Summary:

cytosol 2
plastid 1
plasma membrane 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

unclear: 26455813

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036636	Potato	plasma membrane	70.75	98.25
KRH23631	Soybean	plasma membrane	83.75	84.19
KRH09668	Soybean	endoplasmic reticulum	83.75	84.19
KRH47385	Soybean	endoplasmic reticulum	82.7	83.14
KRH44521	Soybean	endoplasmic reticulum	82.18	82.61
Bra003576.1-P	Field mustard	plasma membrane	73.9	82.55
AT1G80660.1	Thale cress	peroxisome	82.18	82.18
Bra035163.1-P	Field mustard	plasma membrane	78.09	82.14
CDY39956	Canola	plasma membrane	74.11	82.11
VIT_09s0002g02260.t01	Wine grape	cytosol, peroxisome, plasma membrane	82.39	82.05
CDX87330	Canola	plasma membrane	73.9	81.88
Solyc07g017780.2.1	Tomato	nucleus, unclear	82.18	81.24
CDX79363	Canola	plasma membrane	73.17	80.79
Solyc12g010360.1.1	Tomato	plasma membrane	78.09	80.63
CDX67957	Canola	peroxisome	75.16	80.11
Solyc07g005040.2.1	Tomato	cytosol, plasma membrane	32.6	79.54
Solyc03g113400.2.1	Tomato	nucleus	79.35	79.18
Solyc06g071100.2.1	Tomato	nucleus, plastid	79.14	78.97
Solyc08g078200.1.1	Tomato	plastid	73.69	72.77
Solyc02g088060.1.1	Tomato	cytosol	15.09	47.68
Solyc02g011700.1.1	Tomato	extracellular	5.35	45.95

Protein Annotations

KEGG:00190+3.6.3.6	Gene3D:1.20.1110.10	MapMan:24.1.2.3.1	Gene3D:3.40.1110.10	InterPro:ATPase_P-typ_P_site	InterPro:ATPase_P-typ_TM_dom_sf
InterPro:ATPase_P-typ_cation-transptr_N	InterPro:ATPase_P-typ_cyto_dom_N	InterPro:ATPase_P-typ_transduc_dom_A_sf	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0005886	GO:GO:0006139
GO:GO:0006754	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150	GO:GO:0008152	GO:GO:0008553
GO:GO:0009058	GO:GO:0009987	GO:GO:0015992	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0046872	GO:GO:0120029	GO:GO:1902600	InterPro:HAD-like_sf	InterPro:IPR023299
UniProt:K4BLL7	InterPro:P-type_ATPase_IIIA	PFAM:PF00122	PFAM:PF00690	PFAM:PF00702	PRINTS:PR00119
PRINTS:PR00120	ScanProsite:PS00154	PANTHER:PTHR42861	PANTHER:PTHR42861:SF27	InterPro:P_typ_ATPase	SMART:SM00831
SUPFAM:SSF56784	SUPFAM:SSF81653	SUPFAM:SSF81665	EnsemblPlantsGene:Solyc03g117150.2	EnsemblPlants:Solyc03g117150.2.1	TIGRFAMs:TIGR01494
TIGRFAMs:TIGR01647	TMHMM:TMhelix	UniParc:UPI00027674DE	SEG:seg	:	:

Description

ATPase 9, plasma membrane-type [Source:Projected from Arabidopsis thaliana (AT1G80660) UniProtKB/Swiss-Prot;Acc:Q42556]

Coordinates

chr3:+:66383871..66387857

Molecular Weight (calculated)

105407.0 Da

IEP (calculated)

7.725

GRAVY (calculated)

0.107

Length

954 amino acids

Sequence
(BLAST)

001: MADQKETVSL DDIKKENVDL ETIPVEDVFR ILVSSKEGLG SQDATKRLQV FGQNKLEEKK ENKVLKFFGF MWNPLSWVME IAAIIAIVLA NGQHRPPDWQ
101: DFLGIVILLV INSTVSFIEE NNAGNAAAAL MAGLAPKTKV IRDGSWKEMD AALLVPGDVI SIKLGDIVPA DARLLDGDPL KIDQSALTGE SLPVTKYPGE
201: GVYSGSTCKQ GEIEAVVIAT GISTFFGKAA HLVDSTNNVG HFQKVLTAIG NFCICSILVG IIIEILVMYP IQHRKYRDGI DNLLVLLIGG IPIAMPTVLS
301: VTMAIGSHKL SEQGAITKRM TAIEEMAGMD VLCSDKTGTL TLNKLEVDKS LVEVFAKDMD QDTVILLGAR ASRVENQDAI DACIVGMLAD AKEARAGIQE
401: VHFLPFNPVD KRTAITYIDT NGNWHRVSKG APEQIVDLCR LSEHVKRKVH SIIDKFAERG LRSLAVAQQT VPEKTKESPG SPWVFVGLLP LFDPPRHDSA
501: ETIRRALVLG VNVKMITGDQ LAIGKETGRR LGMGTNMYPS SSLLGQHKDE SIANLPVDEL IEMADGFAGV FPEHKYEIVK KLQQRKHICG MTGDGVNDAP
601: ALKKADIGIA VADATDAARS ASDIVLTEPG LSVIVSAVLT SRAIFQRMKN YTIYAVSITI RIVLGFMLIA LIWKFDFSPF MVLIIAILND GTIMTISKDK
701: VKPSPMPDSW KLREIFATGI VLGTYLAVMT VIFFWLAHQS NFFSDRFGVR SIRDNVHKLN AALYLQVSIV SQALIFVTRS RSWSYVERPG LLLLAAFFVA
801: QLVATIIAVY ANWGFARIHG IGWRWAGVIW LYSIIFYIPL DFLKFAIRYI LSGRAWNSMI DNKVAFTNKK DYGRGEREAQ WALAQRTLHG LHPPDSSKMY
901: DNKSYNELSE IAEHAKRRAE VARLRELHTL KGHVESVVKL KGLDIETIQQ HYTV

Best Arabidopsis Sequence Match ( AT3G42640.1 )
(BLAST)

001: MATEFSWDEI KKENVDLERI PVEEVFEQLK CSKEGLSSDE GAKRLEIFGA NKLEEKSENK FLKFLGFMWN PLSWVMESAA IMAIVLANGG GKAPDWQDFI
101: GIMVLLIINS TISFIEENNA GNAAAALMAN LAPKTKVLRD GKWGEQEASI LVPGDLISIK LGDIVPADAR LLEGDPLKID QSALTGESLP TTKHPGDEVF
201: SGSTCKQGEI EAVVIATGVH TFFGKAAHLV DSTNNVGHFQ KVLTSIGNFC ICSIGLGMLI EILIMYPIQH RTYRDGIDNL LVLLIGGIPI AMPTVLSVTM
301: AIGSHRLSQQ GAITKRMTAI EEMAGMDVLC SDKTGTLTLN KLSVDKSLIE VFPKNMDSDS VVLMAARASR IENQDAIDAS IVGMLGDPKE ARAGITEVHF
401: LPFNPVDKRT AITYIDESGD WHRSSKGAPE QIIELCNLQG ETKRKAHEVI DGFAERGLRS LGVAQQTVPE KTKESDGSPW EFVGLLPLFD PPRHDSAETI
501: RRALELGVNV KMITGDQLAI GIETGRRLGM GTNMYPSTSL LGNSKDESLV GIPIDELIEK ADGFAGVFPE HKYEIVKKLQ ERKHICGMTG DGVNDAPALK
601: KADIGIAVAD ATDAARSASD IVLTEPGLSV IISAVLTSRA IFQRMKNYTI YAVSITIRIV LGFMLVALIW RFDFAPFMVL IIAILNDGTI MTISKDRVKP
701: SPVPDSWKLN EIFATGVVLG TYMALTTVLF FWLAHDTDFF SKTFGVRSIQ GNEEELMAAL YLQVSIISQA LIFVTRSRSW SFVERPGFLL LIAFVIAQLV
801: ATLIAVYANW GFARIVGCGW GWAGGIWVYS IITYIPLDIL KFIIRYALTG KAWDNMINQK TAFTTKKDYG KGEREAQWAL AQRTLHGLPP PEAMFNDNKN
901: ELSEIAEQAK RRAEVARLRE LHTLKGHVES VVKLKGLDID TIQQHYTV

Arabidopsis Description

AHA8ATPase 8, plasma membrane-type [Source:UniProtKB/Swiss-Prot;Acc:Q9M2A0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.